| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_3133 |
|---|
| Symbol | |
|---|
| ID | 7311725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 3673267 |
|---|
| End bp | 3673758 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643610036 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002507404 |
|---|
| Protein GI | 220930495 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000028978 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAT TTCTTTTCGG AATAGGAGCA TTCTTTTTTG GATTGATAGT ATGGCTTTTC
TGCCATGATT ACAACTTGAA CCATATGCAC TATAACCAGC TAAAGACAGT AGCGGAAGAA
GCATCAGTGG CAGCAACACT TTTCACAGAA TCTAAGGCTG AAAGTGAAGG GAATATAGTA
TTTAACCAGA CAGAGGGGCA TAAGGCCATA AAAGCAGTAT TAAAGTCAAT GCTAAAAACC
GATGAAAACC TCAATCCGGT GGAAGGAAGC TATTGGCAGG AGAAAATTAC ATACAAAGCA
TACTTCTTTG ACGATTCAAA TACGACATAT CCTAAGAGCT TTACTGATCC GGAAACAGGG
TTTAAGTTTG AGGTGCTGCG GCCTTCGGTT GTGGTTACAA TAAATGCCGG AAAAGCCAGA
TACACTATGG CAGGAATTAT AGATGATACA GTAAATATTC GGAGTGCGGC ACATGAGATT
GTGGGGTGGT AA
|
|---|
| Protein sequence | MKAFLFGIGA FFFGLIVWLF CHDYNLNHMH YNQLKTVAEE ASVAATLFTE SKAESEGNIV
FNQTEGHKAI KAVLKSMLKT DENLNPVEGS YWQEKITYKA YFFDDSNTTY PKSFTDPETG
FKFEVLRPSV VVTINAGKAR YTMAGIIDDT VNIRSAAHEI VGW
|
|---|
| |