Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_3078 |
Symbol | |
ID | 7311675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 3615122 |
End bp | 3616570 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643609980 |
Product | Resolvase domain protein |
Protein accession | YP_002507350 |
Protein GI | 220930441 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.244166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGTG TAAAGTGCGT TATTTATGCT AGATATTCAT CTACAAAACA AGACGAAATA AGTATAGAAG CTCAAGTACG TGCGTGTAAA GAATACGCTG CAAATAGGGA TTACATTGTT TTAAAAGTGT ATACGGATGA AGCTATCTCT GGAAAAGGGA CTAAAACGCA AAGCAGGAAA CAGTACCAAG CTTTATTGCG TGACAGTAAA CAAGGATCGT TTGACGTTGT TTTAGTACAC AGATATGACC GCATAGCCAG AAATGTTGGA GAGCATGTAA ATTTAGAATT AAAGTTATCA GAAAATAATA TATCTCTTGT TGCCGTTTCT CAGGATTTTG GCCAATCAAA AGAAGCAAAG ATAATGAAAA CTATGATGTG GGCATTATCG GAGTATTATA TAGAAAATCT AGCAGACGAA ACAAAAAAAG GCCACAGAGA AGTGGCCTTA AAAGGGCTTC ACAATGGGGG ATGCCCTCCT TTTGGTTACG ATATAAAAAA TCAACAGTAT ATAATCAATG AAAAAGAAGC TTATTTTGTA AAGAAAATAT TTAATTGTGC CTTAAAAAAG GAAGGTTTCA AAGAAATAGT AAGTGAAATA AATAAATCTG GAATGGTAGG AAAACGGGGC AAACCAATAC GATACACACA AGTTTACGAA ATCTTAAGAA ATGAAAAATA TACGGGTGTA TACAAATATA GTCTTAACGA AGAAAGCAAC CGCAGTTTAA GACGTGCAAA ACCTAACGCA ATTAGAATTG AAGGTGCATT ACCACAAATT ATTAATAAAG CTTTATTTCT GGAGGTACAA AAAATAATGG ATGAGAGGAA ACAGACAGGT AAAAAATCTA ATTATCTTTG TAGTGGTCTT GTGTATTGTG GTAATTGTGG ATCAAAAATG TATGGAACTA TAACCCGTCG TAAAGGCCAT GAATACAAAA TATTCTACTG TCATAATAAA TGCGGAACCG GAACTGTAAG CATGGATGAA ATAGATAAGA CTGTCCAAGA ATATATAACA CAATTATTGT CTCCTGGTAC AATCTTATCT ATATCTAATA CTTTAAAAGA ATATGCTTCC AACGAAAAAA AACGAGTCAA TGAGTTTAAT AGCTCAATAA AATTACAAAT TGACGAGAAA CAAAAACAAA TAAACAACTA TATGATATCG CTCGGAAGTG GAGTTCTGCC TGCAGAAGTA ATTTCTGACA TTGGAAACCA AATCGTATCC CTTAAAAATG AAATTAAAGT ATTGGCTGAA ATGCCAGTCC CTAAAGATTA CACCACTAAA GAAATAAATG CATGGCTTAA CAATCTTAGG AAAAGTACGA ATGAAAGAGA TACCGTATTA TTGCTTGTGG AACGTATAGA TGCAACAAAG ACCGCAATCA ATGTAAAATC AACATTAACA ACGGTCTTAT GTGAAAATGG TTGCGGGAGC AGGACTTGA
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Protein sequence | MSSVKCVIYA RYSSTKQDEI SIEAQVRACK EYAANRDYIV LKVYTDEAIS GKGTKTQSRK QYQALLRDSK QGSFDVVLVH RYDRIARNVG EHVNLELKLS ENNISLVAVS QDFGQSKEAK IMKTMMWALS EYYIENLADE TKKGHREVAL KGLHNGGCPP FGYDIKNQQY IINEKEAYFV KKIFNCALKK EGFKEIVSEI NKSGMVGKRG KPIRYTQVYE ILRNEKYTGV YKYSLNEESN RSLRRAKPNA IRIEGALPQI INKALFLEVQ KIMDERKQTG KKSNYLCSGL VYCGNCGSKM YGTITRRKGH EYKIFYCHNK CGTGTVSMDE IDKTVQEYIT QLLSPGTILS ISNTLKEYAS NEKKRVNEFN SSIKLQIDEK QKQINNYMIS LGSGVLPAEV ISDIGNQIVS LKNEIKVLAE MPVPKDYTTK EINAWLNNLR KSTNERDTVL LLVERIDATK TAINVKSTLT TVLCENGCGS RT
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