Gene Ccel_3025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_3025 
Symbol 
ID7311631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand- 
Start bp3578215 
End bp3578916 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content41% 
IMG OID643609927 
Productpeptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 
Protein accessionYP_002507297 
Protein GI220930388 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000000023903 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGTG TAAAGTTTAA GTATTTAGAT GAAGGAACAA TATATCCAAA GTTGATACAA 
GCTGTAAATA CCTTGTGTGC CGCTAAAGGT AAAGATTGCC TCTGTACGTC CGGCTACAGG 
AGCTTAGCAA AGCAAAAACT TATTAATGCT CAATCCTTGG CTCAGAGAAA AAGTCAGGGC 
GGTTTTCAGA AAGCAGATGG TTCTGTGTAT ACTCCTGATG GCAAGTGCTG GGCTGCTGCC 
TATGGTAAAT CAAATCATTG CTTTTGTATT GCAATGGACA TTACAGACCC GTGGTTTAAT 
GCTCTCACAA ATGCGGAATT AAAAAAGTAT GGTCTTGTCA AGCCAATGGA TCACGAACCA 
TGGCACGTAC AATTAATCGA GCATCAGGGC ATAAGCCAGA AACAAAAAGA ATCTATCCGG 
GACGGTGTAC TGAAAGGAGT TGACAATGGC ATGGATATAA AAGAGTTTCA GGCAATGACA 
GGACTAAAAA CAGACGGAAT TGCTGGCCCT AAAACAAAGG CTAAGGCAAA AGAAATATTA 
CAGTCCTGCC AGGAGATACT TGGTAACAAC TTTAAGACTG CCGAGGATGC TATAAAAGCA 
ACTCAATCTA GCCCTAAGTT ATGGCTAGGA CTGATTAAAA CATTGAAGTA CTTTGACAGC 
TTTATCATGA ACATTGTTAA CAAGATGGGA GGACGTACAT AA
 
Protein sequence
MASVKFKYLD EGTIYPKLIQ AVNTLCAAKG KDCLCTSGYR SLAKQKLINA QSLAQRKSQG 
GFQKADGSVY TPDGKCWAAA YGKSNHCFCI AMDITDPWFN ALTNAELKKY GLVKPMDHEP 
WHVQLIEHQG ISQKQKESIR DGVLKGVDNG MDIKEFQAMT GLKTDGIAGP KTKAKAKEIL 
QSCQEILGNN FKTAEDAIKA TQSSPKLWLG LIKTLKYFDS FIMNIVNKMG GRT