Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_3014 |
Symbol | |
ID | 7311622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 3564843 |
End bp | 3566402 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643609918 |
Product | GerA spore germination protein |
Protein accession | YP_002507288 |
Protein GI | 220930379 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACATGG TGATTATATT GAGCTTATGG AAAAAAAATA AAAATGATGC TAAAAGTAAA ACCATTACAC CCGGAAAGCA GTCTGGAGCA GACAGCATTT CATCAACATT ATCAAAAAAT ATAGACCTTT TCAGGAATAT CTTTCGCGAC GATGATACTT TCATTGTAAG GCATGTTGAG AATCAACATA ATAAGTCAAT AAAATGCTGT GTTCTTTTTA TGGAAGAAAT GATTGACACT ACTATAGTGA ACGAAAATAT ACTCCGACCA ATAATGCAAG ATAGCACCTT GAAAAATAAT AATGACACCC TAGTGCAGTT TCAGAATAGA GTAATTACAT CAGATAATAT AAAGAGGAGT TCAGATGTAA ACTTATTAAC AAATTCGATA TTAAAAGGTG ATACTGTGCT GTTGCTCGAG GATTGCTATG AGGCATTAAT TATCAGCTCC ATTGGAGTAA AGAGCAGAGC TATACAGGAA CCGGAGGCTG AGAAGCTTAT AAGAGGTCCT AGAGAAGGGT TTACAGAACC CTTAATGATT AATTTGTCAT TATTGCGAAA AAGATTGGAA ACTCCAGATC TGAAATTTAA GTTTTTGACT TTGGGTACCA AGACCAATAC AAAGATATGC ATCTGTTATT TGGATAGTTT GGTAAATCGT AAAATTTTAA ATGAAGTGGA AACGAGACTC AGGAGCATCA AAATAGATGG TATCCTTGCA TCCGGTTATA TCGGAGAACT TATTAATGAT GAACCATATT CGCCTTTCAA AACAGTAGGG AGCACTGAAC GACCTGATGT TGTTGTGGGA AAGCTTTTGG AAGGGAGAAT AGCTATTGTT GTGGATGGAA CTCCTGTAGC ACTTACAGTT CCTTATGTGT TTATTGAGTA CTTTCAGATT AACGAGGATT ACTATATAAA TTATTACTTT TCATCAATAA GCAGAATACT TAGAATACTA GGTTTTATAT TAACAGTGAG TGTCCCGGCA ATATATGTGG CGCTAATGAC TTTTCAGCAG GAAATGATAC CTACACCTTT GCTGATAAGT ATATCATCTT CAAGGCAGGG AGTACCTTTT CCGACAATAG TTGAAACAAT GTTACTGTTA ATAGTTTTTG AAATATTGAG AGAAACCGGT ACCCGTATGC CAACCAATAT AGGACAGGCA CTTAGCATAG TAGGTGCATT GGTATTGGGG CAGGCATCTG TACAAGCAAA AATTGTGAGT GCCCCTGTTG TGATTGTGGT TGCAATTTCG GGAATTACCA GTCTTATGAT CCCCAAAATA CAGGGAGCTG CAATTGTTCT CAGAGTTATA TTTCTGCTTC TATCTGCATT TTTAGGTTTT TACGGTCTGA TATTCGGTAT AACTGGTACT TTATTGCATC TTTGTGAGAT GCGATCCTTC GGGGTCCCCT ATTTGTTGTA TTTAACCTCT ATGAATCCTT ATGACTTAAA AGATACCATA ATAAGAGCTC CGTTGTGGAA AATGAAAAAA AGACCTAAAT TGATTTCAAC CGATAACATG ATGAGACAAG TGATAGGGAG AAAAAAATGA
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Protein sequence | MDMVIILSLW KKNKNDAKSK TITPGKQSGA DSISSTLSKN IDLFRNIFRD DDTFIVRHVE NQHNKSIKCC VLFMEEMIDT TIVNENILRP IMQDSTLKNN NDTLVQFQNR VITSDNIKRS SDVNLLTNSI LKGDTVLLLE DCYEALIISS IGVKSRAIQE PEAEKLIRGP REGFTEPLMI NLSLLRKRLE TPDLKFKFLT LGTKTNTKIC ICYLDSLVNR KILNEVETRL RSIKIDGILA SGYIGELIND EPYSPFKTVG STERPDVVVG KLLEGRIAIV VDGTPVALTV PYVFIEYFQI NEDYYINYYF SSISRILRIL GFILTVSVPA IYVALMTFQQ EMIPTPLLIS ISSSRQGVPF PTIVETMLLL IVFEILRETG TRMPTNIGQA LSIVGALVLG QASVQAKIVS APVVIVVAIS GITSLMIPKI QGAAIVLRVI FLLLSAFLGF YGLIFGITGT LLHLCEMRSF GVPYLLYLTS MNPYDLKDTI IRAPLWKMKK RPKLISTDNM MRQVIGRKK
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