| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2941 |
|---|
| Symbol | |
|---|
| ID | 7311553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 3500650 |
|---|
| End bp | 3501402 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643609841 |
|---|
| Product | cell wall hydrolase/autolysin |
|---|
| Protein accession | YP_002507215 |
|---|
| Protein GI | 220930306 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000101461 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGG ATAAACTGAT CGAAAAATTA AGCCCTAGGC TTAGTCATAG AAGTCTCATA
GCTATGATAG TTATCCTTTC AGTAGCCATT ATTGCATTAT TGGGTATAAT TTTTAGAAAT
GATGTTATTT TACCTCTAAG CAGTCTCACA TCCCATAGTG AAGATTCAAA TGTCGCTTCT
ATGCCTCCTT TGGTGGTAAT AGACCCGGGA CACGGAGGAA GCGAACCCGG AGCAGGCAGC
GGTTCAATAA ATGAAAAGGA AATTACTCTT GCTATCTCAT TAGAAGTAGA AAAAATACTT
AATGAAAAAA ATATTGACAA TATACTCACC AGAAGTAATG ACACTGCCGT AAGTCTGGAA
GACAGGGCAA AGCTTGCCAA CGAGAAAAAA AGCACACTGT TCATAAGTAT ACATAATAAT
TCTTTTACCG ATCCGGCTTC TCACGGAGTC CTTACTACAT ATAACCCATA TTCACCTATC
GGCAAGAGTA ATGCAGAAAT TATGCAATCA AAGCTTAAAA CTCTTGGGAT GTATAATAGG
AAAATCGTAC CACGCCCGAA TTTGTACGTT CTTCGTCATA CGAAAATGCC GTCATTGCTT
CTGGAAATAG GTTTTATTTC AAATAAGAAT GATCTAAAAC TTTTAACCTC TTCCGATTTT
CAAAAAAAAT GTGCCATACA GATTGTAAAG GGCATAGAAG AAATTCTGGA GACAAATGCT
ACTGCCTCAT CAGAAAGCTC CTCAGAAGTG TGA
|
|---|
| Protein sequence | MKLDKLIEKL SPRLSHRSLI AMIVILSVAI IALLGIIFRN DVILPLSSLT SHSEDSNVAS
MPPLVVIDPG HGGSEPGAGS GSINEKEITL AISLEVEKIL NEKNIDNILT RSNDTAVSLE
DRAKLANEKK STLFISIHNN SFTDPASHGV LTTYNPYSPI GKSNAEIMQS KLKTLGMYNR
KIVPRPNLYV LRHTKMPSLL LEIGFISNKN DLKLLTSSDF QKKCAIQIVK GIEEILETNA
TASSESSSEV
|
|---|
| |