| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2940 |
|---|
| Symbol | |
|---|
| ID | 7312427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 3499733 |
|---|
| End bp | 3500530 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643609840 |
|---|
| Product | NLP/P60 protein |
|---|
| Protein accession | YP_002507214 |
|---|
| Protein GI | 220930305 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000104581 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATC TTAATAAGAG GTTTGTATCA AGTTTTATAG TTTTGTCTTT ATGTGCGGTT
ACAGCTGTAC CTATTTACAA TCTTACAGCT ATAAAAGAGG AAAAAAAGGT ATTTCCTGAA
ATCGAATTGA ACATGTCTGA GACGGAGAAG ACAGTAAAAT CGGAACGCCA ATTATTATAT
ACTAGTTTAA ACTACTCGGC GGTGGAAGCG ACTAAAACAG AACCGACACA AGCGGTAACT
AAAGCCGCAC CAGCAAAAGA AACTGCAAGT TCTGTAAAAA AGACAACCAC AAGTAAGACT
AAAACAGCAA CTACAAGCAC CATTAAAAAA ACATCCACAG TAAAAAAAGC AGCTGTGTCA
CAAACTACAA GAAAAACTGT TACAAAGCCG TCCACAAGCA GAAGTAATAC AAGTACGGCT
CCTGCAACAA CGTCAAAGGC TTCGGTTGTA ATATCTACTG CAAAAAAATA TATAGGTGTA
CCTTATGTAT GGGGTGGTAC AACTCCAAGC GGCTTTGACT GTTCCGGTTA TATTAAATAC
GTTTTTGCAA AACACGGAAT AAGCCTTCCT AGAACTGCTG CAGAGCAATA CAATGCCGGT
TCATATGTCT CAAAGGCAAA TCTTAAAGCC GGAGACTTAG TCTTTTTTAC AACATATAAG
CCAGGTCCGT CCCACTTGGG TATTTATCTG GGTAACGGAA GTTTTATTCA TGCAAGTTCT
TCACAGGGAG TTATTATCTC TAGCCTTAGC AACAGCTACT TTGCTGAGAG ATATATAGGG
GCTAGAAGAA TTATATAA
|
|---|
| Protein sequence | MINLNKRFVS SFIVLSLCAV TAVPIYNLTA IKEEKKVFPE IELNMSETEK TVKSERQLLY
TSLNYSAVEA TKTEPTQAVT KAAPAKETAS SVKKTTTSKT KTATTSTIKK TSTVKKAAVS
QTTRKTVTKP STSRSNTSTA PATTSKASVV ISTAKKYIGV PYVWGGTTPS GFDCSGYIKY
VFAKHGISLP RTAAEQYNAG SYVSKANLKA GDLVFFTTYK PGPSHLGIYL GNGSFIHASS
SQGVIISSLS NSYFAERYIG ARRII
|
|---|
| |