Gene Ccel_2929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_2929 
Symbol 
ID7311543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp3487440 
End bp3488714 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content41% 
IMG OID643609829 
Productnucleotide sugar dehydrogenase 
Protein accessionYP_002507203 
Protein GI220930294 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0320263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGTCA TTAACAATAA GAAAAAAATA TGTATTATCG GTCTTGGTTA TATCGGTTTG 
CCAACTGCCG CTATGTTCGC AACACATGGT CACAGTATTG TCGGCGTTGA CGTAAAAGAA
GAAGTTGTTG ATTCACTTAA CCAAGGAAAG ATAATCATTG AGGAACCTTA TCTGGACATT
ATGGTACAGG CAGCTGTCAC ATCAGGGAAT TTGAGAGCAC AGCTCACTCC TGAGGAAGCT
GATGTTTTTA TTATATCGGT ACCGACACCA ATTAATGCTG ACAAGACAGC TGATATGAGG
TTTGTACGTT CGGCAACCGA ATCTATTGTG CCTTATCTGC GTGAAGGCAA CATTATAATA
TTGGAATCTA CATCACCGCC GGGAACAGTT GAAGGCCTGA TGCTTCCTAT TTTAAAGGAA
TCAGGACTTG AAATCGGAAC TCAGCTTCTT GTTGCACACT CCCCAGAGCG TGTTTTACCC
GGTAAAATTC TGGTTGAACT AGTAGAAAAC AATAGAATTG TCGGAGGTGT AACTCCAGCA
TCCAGCAAAG CTGTACGTGA CCTTTACAAA ACCTTTGTAA AGGGAGAAAT TTTTCTTACA
AATGCTACAA CCGCTGAAAT GTGCAAATTG ATGGAAAACA CCTTTAGAGA TGTTAATATT
GCACTGGCAA ATGAACTTGC AAAACTTTGC GAAAAAATGG GTATAAACGC ATGGGATGTT
ATTAAATATT CAAACAAACA CCCCAGGGTC AATCTTCACC AACCCGGCCC AGGCGTTGGC
GGACACTGTC TTGCAGTTGA CCCTTGGTTT ATTGTTGAAA AGGAACCTGA GCTTGCTAAA
ATAATTAAGC TCAGCAGAAT GACCAACGAC AGTATGCCTC ATCATGTTTT CAATCGCTCA
AAAAGTATTC TTTCAGCGGT TGATGGCATT AAAAAGGTAA TAGTACTGGG GGCTACCTAC
AAGCCAAACA TCGATGATAT GCGTGAAAGC CCGGTTATGG AACTTATTGA TTTATTTAAA
CAGGATCCAA ACTTCGATGT TTGTATTTAC GATCCGCATA TTGCTTCACA CGAGCTTATC
TGCAATAATC TGGTAGAAGC TGTTAGCGGA GGTCATCTGA TAATACTTGG TGTTAACCAT
GATGAATTTG CTAAAATCGA TTTTTCAAAG CTGCAGCCGC TGATGGCAGA AGCCAACATA
TTTGATACAA GAAACTTCTA TGACAGATCA GAATTGACAG CAGCAGGCTT TAATACTTAT
CTGCTTGGAG CATAA
 
Protein sequence
MIVINNKKKI CIIGLGYIGL PTAAMFATHG HSIVGVDVKE EVVDSLNQGK IIIEEPYLDI 
MVQAAVTSGN LRAQLTPEEA DVFIISVPTP INADKTADMR FVRSATESIV PYLREGNIII
LESTSPPGTV EGLMLPILKE SGLEIGTQLL VAHSPERVLP GKILVELVEN NRIVGGVTPA
SSKAVRDLYK TFVKGEIFLT NATTAEMCKL MENTFRDVNI ALANELAKLC EKMGINAWDV
IKYSNKHPRV NLHQPGPGVG GHCLAVDPWF IVEKEPELAK IIKLSRMTND SMPHHVFNRS
KSILSAVDGI KKVIVLGATY KPNIDDMRES PVMELIDLFK QDPNFDVCIY DPHIASHELI
CNNLVEAVSG GHLIILGVNH DEFAKIDFSK LQPLMAEANI FDTRNFYDRS ELTAAGFNTY
LLGA