| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2904 |
|---|
| Symbol | |
|---|
| ID | 7311520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 3458900 |
|---|
| End bp | 3460147 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643609804 |
|---|
| Product | carboxyl-terminal protease |
|---|
| Protein accession | YP_002507178 |
|---|
| Protein GI | 220930269 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0010841 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAATA TGAAGGACCA AGAAACGAAA CGTCTGTTTT CAGTAATAAC CATGACGGCA
GTGGTGTGTT TTACAATATC AATCCTAGTG TATGGCGGCT TAATGTATTT TAACGGAAGT
TATTCACTGA TATTCAATAA AAATAGTGTA GACAGGGAAA CGATACAAAA ATTTAATGAA
GCAAGAAGTA TACTTCAGAA AGCCTATTAT GAAAATGTAG ACACTAACAA ACTGGTGGAG
GGTGCAATTA GCGGTATGAC AGAGTCACTG AATGATCCCT ATACAGTATA TTATAATAAG
CAGCAAATGA AGTGGTTTAC AGGTCTTCAG AACAATACAG AGAATGAGTA TGTGGGGGTT
GGACTGCCGA TAATGCTAGA TAAAAACGGA ATAGTAACCG TTTTAGAGCC TTACGATAAT
TCCCCTGCAA AAATTGCAGG AATCAAGCAA GGAGATAAAA TACTTAAAAT AGATGGTAAA
GACATAACAG GAATCAAGGA TGAAACACTG GTTGCCAGCA TGATTAAAGG ACCTGAGAAC
ACCGAGACGG TTCTGACTAT TCTTCGAGAA TCAGACAACA GTACCATTGA TATCCCAGTA
ATGAGAAAAA AGATTAAAGC CCTGGTGAAT ATAAGAAGTG AAATGTTGGA TGGAAATATT
GCATATATTA AGCTTAAAAT GTTTGATAAA AATATTAGCA AGAACTTTAT CAGTCAGTTA
AACAAATTGG TTAAGCAAGG TGCTAAAGGC TTAATAATAG ATGTGAGGGA CAATCCGGGG
GGATTATATG ATGAAGTAGT GACATTGGCA GACCGACTTC TTCCAAAGGG AACAATAGTA
TTTACAAAGG ATAAAAACGG TAAAAAAAGT GTGCAGTCGT CTGATGAAAA TGAACTTAAT
ATGCCCATAG CTGTAATTAC AAATGGTAAC AGTGCAAGTG CTTCGGAAAT TCTGGCAGGT
GCTGTTAAGG ACTTTAAAAA GGGAACACTA ATAGGAACTA AAACCTTTGG AAAAGGACTG
GTGCAGACAA CCTATTCTTT TAAGGACGGA ACAGGACTTA AGGTAACAAT AGCAAGGTAT
TATACACCTT CCGGTGTTTG TATACAGGGA CAGGGTATAA AACCTGAAAT CGAAGTAAAG
CTTCCCGAAA AGTACAAAGA CATCGATGTT GCAGCAATTC CCAAGGAAGA TGACTTACAA
CTTCAAAAGG GTATTGAAGT TATTAGCAAA AAAATAATAT CAGATTAG
|
|---|
| Protein sequence | MLNMKDQETK RLFSVITMTA VVCFTISILV YGGLMYFNGS YSLIFNKNSV DRETIQKFNE
ARSILQKAYY ENVDTNKLVE GAISGMTESL NDPYTVYYNK QQMKWFTGLQ NNTENEYVGV
GLPIMLDKNG IVTVLEPYDN SPAKIAGIKQ GDKILKIDGK DITGIKDETL VASMIKGPEN
TETVLTILRE SDNSTIDIPV MRKKIKALVN IRSEMLDGNI AYIKLKMFDK NISKNFISQL
NKLVKQGAKG LIIDVRDNPG GLYDEVVTLA DRLLPKGTIV FTKDKNGKKS VQSSDENELN
MPIAVITNGN SASASEILAG AVKDFKKGTL IGTKTFGKGL VQTTYSFKDG TGLKVTIARY
YTPSGVCIQG QGIKPEIEVK LPEKYKDIDV AAIPKEDDLQ LQKGIEVISK KIISD
|
|---|
| |