Gene Ccel_2890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_2890 
Symbol 
ID7311505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp3448402 
End bp3449190 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content37% 
IMG OID643609785 
Productcell wall hydrolase/autolysin 
Protein accessionYP_002507164 
Protein GI220930255 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID[TIGR02883] N-acetylmuramoyl-L-alanine amidase CwlD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00534864 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGTTT TAATAAGCAA AAAAAATATA TTGTTTGTTG TTCTGTTATT ACTTATGTCC 
ATAACAATTC TAAGTATTGG TTTGACAGTT AATTATTCAA AGCCTGTAAC AGCAGATGGT
AATAAAGCAC CCGCAGAAGG TGTTGCACCT GCTGTCAGAA CCGTTATACT GGATGCAGGT
CATGGAGGAG AGGACCCGGG AGCAGTAAGT GATTACTCCG GACTAAAGGA AAAGGATGTA
AACCTTAATA TAGTCATGCT ATTAAAAAGG TTGATGGAAA AGGATAATTA CAAGGTTATC
CTTACAAGAG ATTCAGACCG TTTGGTGTAT ACTACCGAGA GCAACAATAT AATTCAGAAA
AGAAGAGAAG ATTTGACAAG AAGAAAGGGA ATTATGGATG ACTCCAGTGC TGATTTGGTA
GTAAGTGTTC ACCTCAATAA ATTTCCTCAG GCACAGTACC ATGGGGCACA GGTTTTCTTC
CCGCCAAAAT CCGATACAAG CAAAAAGCTG GCGGATGAAA TTCAAAATGC AATCAGGCTT
AACGTAGATA ATGCCAATGA CAGGGTTGCT CTTGTAAAAA AAGATCCTAT TATGATTCTG
AAAAACCTGA AAACAACTAC AGTTATTGTT GAGTGTGGAT TCCTTTCAAA TGTTGATGAG
GAAAAGAAGC TTGCTGCAGA AGATTATCAG AATAAGCTTG CATCTGCCAT AAAGAAAGGA
ATAGACAGCT ATTATAAGAA AGATGTTCAT AACAACCCAA AACCAAACAA TAGTGTTCCT
GCTGAATAA
 
Protein sequence
MIVLISKKNI LFVVLLLLMS ITILSIGLTV NYSKPVTADG NKAPAEGVAP AVRTVILDAG 
HGGEDPGAVS DYSGLKEKDV NLNIVMLLKR LMEKDNYKVI LTRDSDRLVY TTESNNIIQK
RREDLTRRKG IMDDSSADLV VSVHLNKFPQ AQYHGAQVFF PPKSDTSKKL ADEIQNAIRL
NVDNANDRVA LVKKDPIMIL KNLKTTTVIV ECGFLSNVDE EKKLAAEDYQ NKLASAIKKG
IDSYYKKDVH NNPKPNNSVP AE