Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2890 |
Symbol | |
ID | 7311505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 3448402 |
End bp | 3449190 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643609785 |
Product | cell wall hydrolase/autolysin |
Protein accession | YP_002507164 |
Protein GI | 220930255 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | [TIGR02883] N-acetylmuramoyl-L-alanine amidase CwlD |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00534864 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGTTT TAATAAGCAA AAAAAATATA TTGTTTGTTG TTCTGTTATT ACTTATGTCC ATAACAATTC TAAGTATTGG TTTGACAGTT AATTATTCAA AGCCTGTAAC AGCAGATGGT AATAAAGCAC CCGCAGAAGG TGTTGCACCT GCTGTCAGAA CCGTTATACT GGATGCAGGT CATGGAGGAG AGGACCCGGG AGCAGTAAGT GATTACTCCG GACTAAAGGA AAAGGATGTA AACCTTAATA TAGTCATGCT ATTAAAAAGG TTGATGGAAA AGGATAATTA CAAGGTTATC CTTACAAGAG ATTCAGACCG TTTGGTGTAT ACTACCGAGA GCAACAATAT AATTCAGAAA AGAAGAGAAG ATTTGACAAG AAGAAAGGGA ATTATGGATG ACTCCAGTGC TGATTTGGTA GTAAGTGTTC ACCTCAATAA ATTTCCTCAG GCACAGTACC ATGGGGCACA GGTTTTCTTC CCGCCAAAAT CCGATACAAG CAAAAAGCTG GCGGATGAAA TTCAAAATGC AATCAGGCTT AACGTAGATA ATGCCAATGA CAGGGTTGCT CTTGTAAAAA AAGATCCTAT TATGATTCTG AAAAACCTGA AAACAACTAC AGTTATTGTT GAGTGTGGAT TCCTTTCAAA TGTTGATGAG GAAAAGAAGC TTGCTGCAGA AGATTATCAG AATAAGCTTG CATCTGCCAT AAAGAAAGGA ATAGACAGCT ATTATAAGAA AGATGTTCAT AACAACCCAA AACCAAACAA TAGTGTTCCT GCTGAATAA
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Protein sequence | MIVLISKKNI LFVVLLLLMS ITILSIGLTV NYSKPVTADG NKAPAEGVAP AVRTVILDAG HGGEDPGAVS DYSGLKEKDV NLNIVMLLKR LMEKDNYKVI LTRDSDRLVY TTESNNIIQK RREDLTRRKG IMDDSSADLV VSVHLNKFPQ AQYHGAQVFF PPKSDTSKKL ADEIQNAIRL NVDNANDRVA LVKKDPIMIL KNLKTTTVIV ECGFLSNVDE EKKLAAEDYQ NKLASAIKKG IDSYYKKDVH NNPKPNNSVP AE
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