Gene Ccel_2870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_2870 
Symbol 
ID7311488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp3420955 
End bp3421506 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content40% 
IMG OID643609765 
ProductUracil-DNA glycosylase superfamily 
Protein accessionYP_002507144 
Protein GI220930235 
COG category[L] Replication, recombination and repair 
COG ID[COG3663] G:T/U mismatch-specific DNA glycosylase 
TIGRFAM ID[TIGR00584] mismatch-specific thymine-DNA glycosylate (mug) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.077705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAATA TTTATAATGA AAAGCCGTTG CCGGACATTC TTGCAACGGG ACTTAAAGTT 
GTTTTTATAG GTTATAATCC GGGCTTGCTT TCTGCCAGAA ACAGGCACCA CTATTCTCAT
AAAAGCAACA GATTCTGGAG GTTTTTGTAT GAATCGGGTC TGACACCTTC CAGATTCGAG
CCTGAGGATG ACAGGAAAAT ACTTGAGTTT GGATATGGCT CCACAAATAT TGTTGACAGA
CCGTCTAAAG CTGCCAACGA AATTGGCACT GATGAAGTTG TTGAAGGTTC GGCAAACATT
TACAGGCTTT TGGATAATTT TAAACCTCGA ATTGCCTGCT ATGTGGGAAT AGGAGTGTAC
CGTGCATATG CTTCTAGTAT TTTGAGGGTA CCTGCATCTG GAATTAATGT TAAGCCTGGA
CTTCAATCCG CAAGTATACT GGAATCTATA TCGGATTTTG TTTGCTACAG TACAAGCGGG
CTGAATACAG TTCCTTTTGC CGAACAACGC AAGTGTTTTG AAAATTTGAA AAAATTATTG
GACTCTATCT GA
 
Protein sequence
MDNIYNEKPL PDILATGLKV VFIGYNPGLL SARNRHHYSH KSNRFWRFLY ESGLTPSRFE 
PEDDRKILEF GYGSTNIVDR PSKAANEIGT DEVVEGSANI YRLLDNFKPR IACYVGIGVY
RAYASSILRV PASGINVKPG LQSASILESI SDFVCYSTSG LNTVPFAEQR KCFENLKKLL
DSI