Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2870 |
Symbol | |
ID | 7311488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 3420955 |
End bp | 3421506 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643609765 |
Product | Uracil-DNA glycosylase superfamily |
Protein accession | YP_002507144 |
Protein GI | 220930235 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3663] G:T/U mismatch-specific DNA glycosylase |
TIGRFAM ID | [TIGR00584] mismatch-specific thymine-DNA glycosylate (mug) |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.077705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAATA TTTATAATGA AAAGCCGTTG CCGGACATTC TTGCAACGGG ACTTAAAGTT GTTTTTATAG GTTATAATCC GGGCTTGCTT TCTGCCAGAA ACAGGCACCA CTATTCTCAT AAAAGCAACA GATTCTGGAG GTTTTTGTAT GAATCGGGTC TGACACCTTC CAGATTCGAG CCTGAGGATG ACAGGAAAAT ACTTGAGTTT GGATATGGCT CCACAAATAT TGTTGACAGA CCGTCTAAAG CTGCCAACGA AATTGGCACT GATGAAGTTG TTGAAGGTTC GGCAAACATT TACAGGCTTT TGGATAATTT TAAACCTCGA ATTGCCTGCT ATGTGGGAAT AGGAGTGTAC CGTGCATATG CTTCTAGTAT TTTGAGGGTA CCTGCATCTG GAATTAATGT TAAGCCTGGA CTTCAATCCG CAAGTATACT GGAATCTATA TCGGATTTTG TTTGCTACAG TACAAGCGGG CTGAATACAG TTCCTTTTGC CGAACAACGC AAGTGTTTTG AAAATTTGAA AAAATTATTG GACTCTATCT GA
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Protein sequence | MDNIYNEKPL PDILATGLKV VFIGYNPGLL SARNRHHYSH KSNRFWRFLY ESGLTPSRFE PEDDRKILEF GYGSTNIVDR PSKAANEIGT DEVVEGSANI YRLLDNFKPR IACYVGIGVY RAYASSILRV PASGINVKPG LQSASILESI SDFVCYSTSG LNTVPFAEQR KCFENLKKLL DSI
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