| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2868 |
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| Symbol | |
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| ID | 7311486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | - |
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| Start bp | 3419162 |
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| End bp | 3420544 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643609763 |
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| Product | RNA methyltransferase, TrmA family |
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| Protein accession | YP_002507142 |
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| Protein GI | 220930233 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00253017 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGC CGTCTCATAA GATATTTTTA CAGAAGAAAA TATATAAAAT GGACATAACA
GGCTTGACTC ACGAAGGACA GGGAGTAGGA AAGATTGAGG GGTTTGTGGT TTTTGTTGAC
GGGGTTCTTC CCGGAGAAAA TGTTGACATC AAAATAGTAA AACAAACCAA GAGCTATGCA
GTGGGAAGGC TTGTTAACAT AAACAAGCCT TCGGAGAACA GGATCAAACC ATTTTGTCCT
GTTTTTGACA AATGCGGAGG ATGTGCCGTT CAGCACATGA CTTATCAGGC ACAGCTTGAT
TTCAAAAAGG ATACTGTTCT GCAAAATATC AGAAGGATTG GTGGTATTCA GGACGTTGTA
GTTAATGATA CAATTGGAAT GGAAAACCCT TATAAGTACA GGAACAAGGT CCAATACCCT
GTTGGTTGGG ATAATGGTGA AATCACAATT GGATTCTATG AGACAAGGTC TCACAATATT
ATTGACGGAA GTTTGTGTGA TATCCAGCCT GATGAGAGTA ATAAAATTAG GGATATTGTA
AGAAGTTTTT GCAAGGATGC GGGCATAGCC ATTTATGATG AGAAAACAGG CAAGGGACTA
CTTCGTCATG TAATGGTTAG AAAGGGCTTT CGAACCAATG AAATCATGGT AGTTCTGGTT
ATCAACGGTG ATAAACTGTT AAAATCTGAT GATTTGGTTA AAAAATTGCT TGAAGAATTT
CCTGATATTA AGAGTATTAT TCTGAATGTA AATACCAAAA ATACTAATAT AATCCTCGGA
AATAAAAACA TATGTATTTA CGGGCAGATG TACATAACTG ACTTCATAGG AAGCTTCAAA
TTTGAGATTT CCCCCTTGTC TTTTTTTCAG GTCAATCCTA TTCAGACAGA AGTATTGTAT
GAAAAGGCAC TGGAATATGC AGGCCTTTCC GGCAATGAAA CTGTTTTTGA CCTTTACTGC
GGTATAGGAA CTATTTCGCT TTACCTTTCT CAGAGGGCAA AACGTGTTAT AGGAGTGGAA
GTTGTCCCAG ATGCTATTAG TGATGCCAGA AGGAATGCCG AACTCAATGG TATCACTAAT
GTGGAATTTC TGGTGGGAGA GGCAGAGAAG GTTATCCCTG ATATGTATTC ACAGGGAGTA
AAAGCGGATG TGGTGGTGGT TGATCCGCCA AGAAAAGGCT GTGACGAGGT TTTGCTCAGT
ACACTGGTGG AAATGCAGCC TCAGCGGATA GTTTACGTCA GCTGTAACCC GTCCACACTG
GCAAGGGACT TGAAGTACCT GACTGAGCAT GGGTTCGAGG TTAAGGAAGT GCAGCCAGTC
GATATGTTCC CGTGGACGGG GCATGTTGAG TGTGTTGTCT TGATGTCAAG GGTTGAGAAA
TAA
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| Protein sequence | MKQPSHKIFL QKKIYKMDIT GLTHEGQGVG KIEGFVVFVD GVLPGENVDI KIVKQTKSYA
VGRLVNINKP SENRIKPFCP VFDKCGGCAV QHMTYQAQLD FKKDTVLQNI RRIGGIQDVV
VNDTIGMENP YKYRNKVQYP VGWDNGEITI GFYETRSHNI IDGSLCDIQP DESNKIRDIV
RSFCKDAGIA IYDEKTGKGL LRHVMVRKGF RTNEIMVVLV INGDKLLKSD DLVKKLLEEF
PDIKSIILNV NTKNTNIILG NKNICIYGQM YITDFIGSFK FEISPLSFFQ VNPIQTEVLY
EKALEYAGLS GNETVFDLYC GIGTISLYLS QRAKRVIGVE VVPDAISDAR RNAELNGITN
VEFLVGEAEK VIPDMYSQGV KADVVVVDPP RKGCDEVLLS TLVEMQPQRI VYVSCNPSTL
ARDLKYLTEH GFEVKEVQPV DMFPWTGHVE CVVLMSRVEK
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