| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2819 |
|---|
| Symbol | |
|---|
| ID | 7311441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 3375512 |
|---|
| End bp | 3375928 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643609714 |
|---|
| Product | toxin secretion/phage lysis holin |
|---|
| Protein accession | YP_002507093 |
|---|
| Protein GI | 220930184 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4824] Phage-related holin (Lysis protein) |
|---|
| TIGRFAM ID | [TIGR01593] toxin secretion/phage lysis holin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.136308 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGAGA TTTGGAACTG GATTCAAGTG ACATTTGCCG CTATTGGTGG TTGGCTTGGG
TATTTCCTCG GAGGATGGGA CGGATTTTTA TATGCTTTAC TTACTTTTGT TGTGATTGAT
TACATCACAG GTTTAATGTG TGCTGTGCTT GATAAAAAGC TATCCAGTGA GGTAGGCTTT
CGCGGCATAT TCAAGAAAGT ACTCATCTTT TCACTGGTAG CAATCGGTCA CATTATTGAT
AAAAACGTTA TTGGAGATGG CTCTGTTATA CGAACAGCGG TCATCTTTTT TTATCTTTCA
AATGAAGGCA TATCCATACT TGAAAATGCT GTTCATGTTG GTCTGCCTGT GCCACAGAAA
CTCAAGGATA TATTAGAGCA GCTTCACAAT AGAAGCGACA AGGAGGACTA TAAATGA
|
|---|
| Protein sequence | MREIWNWIQV TFAAIGGWLG YFLGGWDGFL YALLTFVVID YITGLMCAVL DKKLSSEVGF
RGIFKKVLIF SLVAIGHIID KNVIGDGSVI RTAVIFFYLS NEGISILENA VHVGLPVPQK
LKDILEQLHN RSDKEDYK
|
|---|
| |