Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2818 |
Symbol | |
ID | 7311440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 3374814 |
End bp | 3375515 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643609713 |
Product | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD |
Protein accession | YP_002507092 |
Protein GI | 220930183 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0569502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTAC GCAAACTATT ACTTACGAAC AATGCCTGCT ATAAAGCGGG CAAAACAATA ACACCGAAGG GTATCATGAT TCACTCAACG GGAGCTAACA ACCCGTGGTT GAAGCGCTAC GTTGGCCCAG ACGATGGCTT GCTAGGAAAG AACCAGTATA ACAACCATTG GAATCAAGAC AAACCTGGAG GGCGTCAAGT TTGTGTTCAT GCCTTTATTG GCAAATTAGC AGATGGTTCC ATTGCTACCT ATCAAACATT GCCTTGGAAT CACCGAGGTT GGCATGCTGG AGGAGCTGCT AATAATTCCC ATATTGGTTT TGAAATTTGC GAGGACGGTT TGACCGATGC CTCGTATTTT TCTGCTGTTT ATAAGGAAGC TGTGGAGCTT TGTGTATATC TTTGCAAACT TTATGGGTTT AGTGAAAGAG ATATCATTTG TCATAGCGAA GGTTATAAAC GAGGCATTGC CAGTAATCAT GCAGACGTGA TGCACTGGTT TCCTAAGCAT GGGAAGAGTA TGGACACCTT TCGAGCGGAT GTAAAGAAAC TATTAAGTGC CGAAAATAAA CCAGCAGACA CGGTGAATAA GAAATATTAC CGTGTGCAGA TCGGTGCTTA TTCTGTTAAA GCAAATGCTG AGGCACAGCT TGCCAAAGCT AAAAAAGCAG GCTTTACGGA TGCATTTATT AAGTATGATT AA
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Protein sequence | MNLRKLLLTN NACYKAGKTI TPKGIMIHST GANNPWLKRY VGPDDGLLGK NQYNNHWNQD KPGGRQVCVH AFIGKLADGS IATYQTLPWN HRGWHAGGAA NNSHIGFEIC EDGLTDASYF SAVYKEAVEL CVYLCKLYGF SERDIICHSE GYKRGIASNH ADVMHWFPKH GKSMDTFRAD VKKLLSAENK PADTVNKKYY RVQIGAYSVK ANAEAQLAKA KKAGFTDAFI KYD
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