Gene Ccel_2798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_2798 
Symbol 
ID7311422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp3354923 
End bp3355555 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content34% 
IMG OID643609696 
ProductAccessory gene regulator B 
Protein accessionYP_002507075 
Protein GI220930166 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms 
COG ID[COG4512] Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000819807 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGGTTTA TAAATAAATG GTCATATACT TGTGCGAAGA GTTTGGCAAG TGTACTTGAA 
GAAAATCACC AAAAAAAAGC GGAATATTAT TTCGGATTTC AAGTAGCTTT GGGTGGTATT
GTTAAAACTG CTTTACTAGT GGCTGTTTCC ATGATCTTGG GAGTGTTGAT TCCTACACTT
ATAGTATCAA TATGTTTTGC ATTACTAAGG AAGGTGGCAG GAGGTTATCA TATGGACACA
TATGGTAAAT GCTTGTTGGT TTCAATAGCA CTATTTGTTT TCGCAGCACT GATTGCAAAA
CATACATACC GGTATTGGAG TATTGCATTA CTGGTAATCT TGATAACCTT AACATTTACC
ATAGGGCTCT ATGTATTGAT TAGATATGCA CCAAGGGATA CGCCCAATAG ATTAATTACA
GACCTCCAAG AAATAAGGAA ATTCAAGGCT TTATCCATTG CATATATTTG TGTATGGCTA
GCGGTGGTTA CAGTATTAAC TATACTTGAA ATGAAAATGT ATACCATCTT ATTATGCTTT
GGTGTATTGC AGGAATTATT TGCAATAACT CCAATACATA TGTTTTTTGA CAAAATAAAA
TATGGTTTGG CTCCTAAACA AAAGCCTTGC TAA
 
Protein sequence
MRFINKWSYT CAKSLASVLE ENHQKKAEYY FGFQVALGGI VKTALLVAVS MILGVLIPTL 
IVSICFALLR KVAGGYHMDT YGKCLLVSIA LFVFAALIAK HTYRYWSIAL LVILITLTFT
IGLYVLIRYA PRDTPNRLIT DLQEIRKFKA LSIAYICVWL AVVTVLTILE MKMYTILLCF
GVLQELFAIT PIHMFFDKIK YGLAPKQKPC