Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2738 |
Symbol | |
ID | 7311370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 3298613 |
End bp | 3300433 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643609648 |
Product | TRAG family protein |
Protein accession | YP_002507027 |
Protein GI | 220930118 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATCCC AAGTTTATAC CCTCATAGCA GTGACCGCCG TGATGTTTTT CGTCATCGGC GGACTCTCTC TTTTGGCACA TTATTATACC TTAAACGGAA TTAAATCAAA AACAGTGGGC GACGGCCAGC ACGGTACCGC ACGTTTCGCC ACCAGAAATG AAATAAAAAA GACTTACACC CATATACCCT ATGAGGTGGG AAAATGGAGA AGAAACGAAA ATTTGCCCCA GGTGCAGGGG ATTGTGGTTG GCTGTAAAAC TAGCGGTAAG ACTGTAACTG CTCTTTTGGA TGAGGGAGAT GTCCACTGTC TTATGATAGG AGCTGCAGGA GTTGGCAAAA CAGCTAATTT TCTTTATCCA AACCTTGAAT ATGCCTGTGC AAGCGGAATG TCATTCCTGA CAACCGACAC CAAGGGTGAT CTGTTCAGAA ATTACGGAAG TATTGCCAAG GACTACTACG GATACAAGGT GTCGGTAATT GATCTGCGTA ATCCTACACG AAGTGACGGC AATAATATGC TGCATCTGGT GAACAAATAC ATGGATGCAT ATCTTAAGGA TCCGGATAAT CTGTCCCTTA AGGCAAGAGC CGAAAGGTAT GCAAAAATTA CTGCGAAAAC GATAGTTAAC TCAGGCGGGA TGGATGCAGG AGCATACGGG CAGAATGCTT TTTTCTATGA AGCAGCAGAG GGGCTTCTGA CTTTTGTAAT ACTTATTATT GCAGAATACT GTCCGCCGGA GAAGCGGCAC ATAATATCTG TATTTAAGCT AATACAGGAT TTACTTGCTC CGTCTGGAGT AAAGGGGAAG AATCAGTTCC AGCTGCTGAT TGAAAAGCTC CCTCCTGAGC ATAAGGCCAG GTGGTTTGCA GGTGCGGCAC TTAACACTGC TGAGCAGGCA ATGCAGTCAG TTCTATCTAC AGCACTTTCA AGACTTAACG CTTTTTTGGA CTCGGAGCTT GAGCAAATAT TGTGCTTTGA CACAGCAGTA GATGCGGAGG AATTCTGTAA CACAAAGCAT GCTGTCTTCC TGGTTATGCC GGAAGAGGAT TCCACAAAGT ATTTTTTTAT ATCGCTCATA GTCCAGCAGT TGTACAGGGA GATACTTTCA GTAGCTGATG AAGCAGGCGG CAGACTTAAA AACAGGGTAA TGTTTTTTCT TGATGAAATA GGTACAATAC CCAAAATAGA CTCAGCAGAA ATGATGTTTT CTGCCTCACG TTCACGTCGG ATATCTATTG TTGCTATAAT ACAGTCTTTT GCACAGCTTG AAAAAAACTA CGGCAAGGAG GGTGCTGCCA TCATAATTGA CAACTGTCAG CTCGTGCTGT TCGGAGGCTT CGCTCCCAAT AGTCATTCAG CAGAAATCCT ATCACAGGCC CTCGGTAATA AAACTGTTAT GTCAGGTTCT ATAAGCAGGG GAAGAAATGA TCCTTCACAA AGCCTTCAAA TGATACAGAG ACCGTTGATG ACAACGGACG AATTAAAAAC CCTCCCGAAA GGAAACTTTA TCCTTGCCAA AACAGGGTGT TATCCAATGA AAACAATATT AAAGCTATTC TTTAAATGGG GTATAGTGTT TAACAAGGTG TATGAGATCA CTGAAAAGTC TTCACGTAAG GTTGCCTATG CCGACCGCAT GGAGCTGGAG CAGGAAATAT TAAAAGGGCA CGCAGCCTGC AATTATATTA ATGAGGATGA ACCGGAAGAT ACTGTCCTAC AAGATGGGTT TAGTCATATA AATAAACAAA GGTATATTGA GCCTGAGCAG GCTGACACAC AGCAGGAGCA AAAGAGCAAG CCGCCGCTCA GGACGGATTA G
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Protein sequence | MPSQVYTLIA VTAVMFFVIG GLSLLAHYYT LNGIKSKTVG DGQHGTARFA TRNEIKKTYT HIPYEVGKWR RNENLPQVQG IVVGCKTSGK TVTALLDEGD VHCLMIGAAG VGKTANFLYP NLEYACASGM SFLTTDTKGD LFRNYGSIAK DYYGYKVSVI DLRNPTRSDG NNMLHLVNKY MDAYLKDPDN LSLKARAERY AKITAKTIVN SGGMDAGAYG QNAFFYEAAE GLLTFVILII AEYCPPEKRH IISVFKLIQD LLAPSGVKGK NQFQLLIEKL PPEHKARWFA GAALNTAEQA MQSVLSTALS RLNAFLDSEL EQILCFDTAV DAEEFCNTKH AVFLVMPEED STKYFFISLI VQQLYREILS VADEAGGRLK NRVMFFLDEI GTIPKIDSAE MMFSASRSRR ISIVAIIQSF AQLEKNYGKE GAAIIIDNCQ LVLFGGFAPN SHSAEILSQA LGNKTVMSGS ISRGRNDPSQ SLQMIQRPLM TTDELKTLPK GNFILAKTGC YPMKTILKLF FKWGIVFNKV YEITEKSSRK VAYADRMELE QEILKGHAAC NYINEDEPED TVLQDGFSHI NKQRYIEPEQ ADTQQEQKSK PPLRTD
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