| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2684 |
|---|
| Symbol | |
|---|
| ID | 7312396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 3231431 |
|---|
| End bp | 3232642 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643609602 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_002506981 |
|---|
| Protein GI | 220930072 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4214] ABC-type xylose transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCCAACA TTATTCAGAT ACTGTCAAGT GAAGTCAATT CTCTAGCAAT TAAATCCTTT
ATTAAAAACA ATGTAAGACA ATATGCAATG GCAGTGGCGT TAGTTGTTAT AATGGTCTTG
TTTCAGTTCC TTACAGATGG TATACTTTTC AAGCCGCTAA ATATTACTAA CCTGGTACTA
CAAAATAGTT ACGTTTTGAT TCTTGGTATT GGAATGCTGC TGGTTATACT TACAGGAAAT
GTTGACCTTT CAGTAGGATC GGTTGCAGCA TTTATAGGTG CTATATCTGC AATATTAATG
ATTGAAATGA AGATGCCGGT TATACCAACG GTTTTGATAT GTCTTGTTAT TGGTGCATTG
GTCGGAGCAT GGCAGGGCTT TTGGATTGCA TACATAAGAA TTCCTGCATT TATTGTTACT
CTGGCAGGCA TGTTAATTTT CAGAGGCTTC ACAATGACAC TGCTTAATGG AAAAACGTTA
TCGCCATATG ATAAATCATT CCAGGCAATG GCAAATGGAT TTCTCCTTTC TGATACAATG
AAGGTCAATG GGATTAACAT GATAGCTGTA ATTACAGGCT TGCTGCTATC GCTTGTATTT
ATTTTCATGG AATACAGAAG CTTAAAGAAT AAGCAAAAAT ATAACTTTGA AACTATACCG
CTTTCACTTA CTATTGCAAA GGTATCAGTT ATTATAATAG CTATAAATCT TCTTACATTC
AGTTTAGCTT CCTACAAGGG TATTCCTATA GTTCTGATTC TTATCGTTGG ACTTATTGTA
ATATATACCT TCATTACACA GAAGACTATA GCTGGACGTC ATATCTATGC ATTAGGCGGA
AATGAAAAAG CAGCTAAGCT TTCAGGTATT AAGACAAAGA GAGTAATGTT CTGGGTATAT
GTAAATATGG GATTGCTCGC AGCGGTTTCG GGACTAATAG TTGCAGGACG TCTCAATGCT
GCTACGCCTA AAGCAGGTGT TAACTTTGAG CTTGATGCAA TAGCTGCATG CTTTATAGGT
GGCGCATCCT CATCAGGTGG TATTGGTACC ATTATAGGAG CGATAATAGG AGCTCTTGTT
ATGGGTGTAT TGAACAACGG TATGTCAATC ATGGGAGTTG GAATAGATTT GCAGCAATCA
ATTAAAGGTT TCGTATTACT TGCTGCTGTA GCGTTTGATG TTTACACAAA ATCAAAGGCA
AATAATGATT AA
|
|---|
| Protein sequence | MPNIIQILSS EVNSLAIKSF IKNNVRQYAM AVALVVIMVL FQFLTDGILF KPLNITNLVL
QNSYVLILGI GMLLVILTGN VDLSVGSVAA FIGAISAILM IEMKMPVIPT VLICLVIGAL
VGAWQGFWIA YIRIPAFIVT LAGMLIFRGF TMTLLNGKTL SPYDKSFQAM ANGFLLSDTM
KVNGINMIAV ITGLLLSLVF IFMEYRSLKN KQKYNFETIP LSLTIAKVSV IIIAINLLTF
SLASYKGIPI VLILIVGLIV IYTFITQKTI AGRHIYALGG NEKAAKLSGI KTKRVMFWVY
VNMGLLAAVS GLIVAGRLNA ATPKAGVNFE LDAIAACFIG GASSSGGIGT IIGAIIGALV
MGVLNNGMSI MGVGIDLQQS IKGFVLLAAV AFDVYTKSKA NND
|
|---|
| |