| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2654 |
|---|
| Symbol | |
|---|
| ID | 7311296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 3199819 |
|---|
| End bp | 3200712 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643609579 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002506958 |
|---|
| Protein GI | 220930049 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 73 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATAATGA ACTCCATTTT CTATCAAAAA AAGATTGAGC AAGCATTGGA ATATGCAGAA
TATAATATTG GTTCGGATTT ATCTTTACAA ACCATATCAA AAATTGCTGG ATTTTCACCT
TACCATTTTC ACCGTATTTT TCATTCGGTT ACAGGGAAAA GTTTGCATCA GTATATCCTG
GAACGCAGGC TCAACAATTG TGCTAGCAAA CTTCTTTATG AAGATTGTGA TATTACGAGG
ATTGCTTTGG ATTTTGGTTT TTCATCTTCA AGTTCATTTG CAAGGAGTTT TAAAAAACAT
TTTGGATGTA CACCAACACA GTATAAAAAA ACAAAAGATC GAAAGTATCC AGTTCCGTTT
TCTGAAATAG TTCTACAGCA GATATCATTT GATCCAGAAT TGGAAAAGCA CTTTAATGAA
ATTGTACTTG CTGATCTTAG AACTATTTGT ATTGGTGTAA CCGGGCTATC AGAAGTATGG
GAAAATCCGG AGATTAACAG GGCTTACGAG CAGATTTTTA CGTGGCTGAA AGAAAACAAA
AAGTTTACAT CAGATACGAA AATTTGTGGT ATTACTATGG ATACACCTGA GGTGCAGAAC
TTATCATCAT GTAGGTACTA TGCCTGTGCA ACCGCAGAAT CATATATTCA TGACGAGCAC
CTTGCTTATA GAGTTTTTCA AACATCCGGA AATTATATTT GCTGTAAAAT TAACCGTTGT
ATAAAAGATT TTGCGGCATG TTTTTTTAAG CATATGGATT ATCTTTATGG GTTTTACATG
GTGTCGCATA AATTTTCTCC TGATAACCGC CCTTTCGTGG AATTCTATGA GAGGATGCCA
GATGGAGATA TTTATATTCA TTTTTGTGTG CCGGTAAAAA ATAGCAAGAA ATGA
|
|---|
| Protein sequence | MIMNSIFYQK KIEQALEYAE YNIGSDLSLQ TISKIAGFSP YHFHRIFHSV TGKSLHQYIL
ERRLNNCASK LLYEDCDITR IALDFGFSSS SSFARSFKKH FGCTPTQYKK TKDRKYPVPF
SEIVLQQISF DPELEKHFNE IVLADLRTIC IGVTGLSEVW ENPEINRAYE QIFTWLKENK
KFTSDTKICG ITMDTPEVQN LSSCRYYACA TAESYIHDEH LAYRVFQTSG NYICCKINRC
IKDFAACFFK HMDYLYGFYM VSHKFSPDNR PFVEFYERMP DGDIYIHFCV PVKNSKK
|
|---|
| |