| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2608 |
|---|
| Symbol | |
|---|
| ID | 7311257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 3142385 |
|---|
| End bp | 3143236 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643609537 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002506916 |
|---|
| Protein GI | 220930007 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAA TGGAAATCAG GAGTATAACG AAAAAATTCG GTGACATGAC AGCCCTGGAT
AATATCAGCC TGAAGCTGGA AGAAAACAAA ATATATGGAC TTTTAGGACG TAACGGGGCT
GGGAAAACCA CGCTGCTGAA CCTTATTACA AACAGAATTT TTCCTACGGA TGGCGAAATC
CTTGTAGACG GCGAAAATGT TATAGAGAAT GAGAGGGTTC TGTCAAAGAT ATATTTTATG
ACTGAAAATA ACTACTATCC TGAGAATATG ACGGTAAAAC AAGCTTTTAA GTGGAGCAGT
GAGTTTTACC CCGATTTTGA CAGTGAATAT GCCGCTGACT TGTGCGAGAA GTTTTCTCTA
AATATAAAAC AAAAGATAAA AAGCTTATCT ACAGGATATA CATCCATTTT CAAAATGATT
CTAGCTTTAG CATGTAATGT GCCTTTTGTT CTGCTGGATG AGCCTGTTCT GGGACTTGAT
GCAAACCACC GCGATTTGTT TTACAAGGAA TTATTAATAA ATTACAGTGA AAAGCCCAAA
ACTATTGTAA TTTCAACGCA CCTGATAGAA GAAGCGGCAG ACATAATAGA GGACGTTATT
ATAATAAAGT CAGGGAAGTT AATAGTGAAG GAGCCGGTAG AGAATGTTCT GTCACAGGGT
TATGCCATAA CAGGAAGCGT ATCGGCGGTT GATAGCTTTA CAAATGATAA AAACGTACTT
GGAGCCGATA CAATAGGGGG CCTCAAATGT GCATATGTTC TGGGGAGTTT GATTAAAGCC
GGTATTCCCG ACGGACTTGA AGTTACCAAA CCCGATTTAC AGAAACTATT TATTCATTTG
ACTAATAGAT AA
|
|---|
| Protein sequence | MSQMEIRSIT KKFGDMTALD NISLKLEENK IYGLLGRNGA GKTTLLNLIT NRIFPTDGEI
LVDGENVIEN ERVLSKIYFM TENNYYPENM TVKQAFKWSS EFYPDFDSEY AADLCEKFSL
NIKQKIKSLS TGYTSIFKMI LALACNVPFV LLDEPVLGLD ANHRDLFYKE LLINYSEKPK
TIVISTHLIE EAADIIEDVI IIKSGKLIVK EPVENVLSQG YAITGSVSAV DSFTNDKNVL
GADTIGGLKC AYVLGSLIKA GIPDGLEVTK PDLQKLFIHL TNR
|
|---|
| |