| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2588 |
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| Symbol | |
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| ID | 7311238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | - |
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| Start bp | 3121794 |
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| End bp | 3122459 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643609517 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_002506896 |
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| Protein GI | 220929987 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.449362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGACTTCG GATTTCTAAG TGAATATTGG TACTATTTTG TAAGCGGTAC CGTAAATACT
ATAGTAATTG CAATTCTCAC TGTAATACTT GGTGTTATTA TAGGTACTGG ACTTGCTTTA
ATGAAGATAT CACGTAACAA GATTTTAAGG GCAATTGCAT CGTCATATAT AGAGTTTATA
AGGGGAACTC CTCTTCTTGT TCAGATTACA CTTTTTTTCT ACTTGATTTC ACTGCCTGAA
TTTCATATTT TTGGTCTTGC AATGGATAGG TATATACCGG GTGTGATCGC CATGTCTGTA
AACAGCGGTG CTTATGTCGC GGAAATAATT CGTGCAGGTA TCCAAGCTGT GGACAAAGGC
CAGATGGAGG CTGCAAGGTC AATCGGTTTT ACCAGCGGGC AGGCTATGAG ATATATTGTT
TTGCCTCAGG CAATCAGGAA CATTCTTCCT GCACTGGGAA ATGAATTTGT GGTAGTAATA
AAGGAATCCT CAATATTATC TGTTATAAGT ATAACTGAGC TTATGAGAAG CTCGGATATT
GTTAAAGCAG CAATTTACAG GCCTTTTGAG CCATTAATTG TAACAGCGTG TATTTACTTT
GTCTTAACCT TTAGTCTTAC AAGACTTCTG GGATTTGCTG AAAGGAGGAT GAGGGCAAGT
GATTAA
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| Protein sequence | MDFGFLSEYW YYFVSGTVNT IVIAILTVIL GVIIGTGLAL MKISRNKILR AIASSYIEFI
RGTPLLVQIT LFFYLISLPE FHIFGLAMDR YIPGVIAMSV NSGAYVAEII RAGIQAVDKG
QMEAARSIGF TSGQAMRYIV LPQAIRNILP ALGNEFVVVI KESSILSVIS ITELMRSSDI
VKAAIYRPFE PLIVTACIYF VLTFSLTRLL GFAERRMRAS D
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