| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2571 |
|---|
| Symbol | |
|---|
| ID | 7311224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 3095600 |
|---|
| End bp | 3096952 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643609500 |
|---|
| Product | citrate synthase |
|---|
| Protein accession | YP_002506879 |
|---|
| Protein GI | 220929970 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0372] Citrate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000324243 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAA GTTTAAATGA ATATATTGAA AAGATGGTAG GTGTAGTTGA TTGTATAAAC
AGAATAGACC CGGAATATTT TACAAAATAT AGTGTAAAAA AAGGTCTTAG AAACAGCGAT
GGCTCGGGAG TTCTGGTAGG CTTGACTGAA ATAGGTGAGG TTCACGGCTA TTTTATCTCT
GAGGGTGAGA GAAAAGAAGA CGAAGGACAC CTTGTTTACA GAGGTATTGA TGTATATGAG
ATGGTAAGGG GATTTCAAAA GGAGAAAAGA TTCGGGTTTG AAGAGGTATG TTATCTGCTG
CTGTTCGCAA AGCTTCCAAA TAGAGATGAG CTTTCAGAGT TTACAGAGCT GCTGGGAGGT
TTAAGAGCCC TACCCGTGGG TTTTACTGAG GATATGATAT TAAAGGCACC CAGCTGTGAT
ATTATGAACA AGCTGGCAAG AAGTGTACTT GCATCTTATT CTTATGATGA CGAACCAGAC
GGCATAGACC CTAAAAACCT GTTGAGACAG AGTATTGAGC TTATAGCGAG ATTTCCTACC
ATGGCTGCTT ACGGATTTCA AGCAAAGTCT CACTATTATG GAGGACAGAG CCTTTATATA
CATAGCCCGT TGCCACAATT GTCAACTGCT GAAAATATAC TGCATATGAT CAGACCTGAC
AATAAATATA CTCAGACTGA AGCAGAAATA CTTGACCTTG CACTGGTACT TCACGCAGAG
CATGGAGGAG GAAACAACTC TACCTTTGCT GCAAGAGTAG TGTCATCTAC TGAAACAGAT
ACATATTCAG CAATTGCTGC TGCAGTCGGC TCTCTCAAGG GACCAAAGCA CGGTGGAGCC
AACATAAAGG CAATGAATAT GCTTTCAGAT ATAAAGGAAC ACGTAAAAGA TTGGACTGAT
GATGACGAAG TAAGAAATTA TCTGATAAAG ATAATAAACA AGGAAGCCTT TGACAAGGCA
GGCCTCATAT ACGGAATGGG TCATGCAGTA TACACTTTGT CAGACCCCAG AACAATTCTG
TTAAAGGAAA AAGCCCACCA GTTGGCAATC GAAAAGGGAA GAGAAAAGGA ATTCCTTCTA
TATGATGCTG TTGAAAGAAT TGCACCTGAT GTATTTGCCC AGGCAAAGGG TACAACAAAA
AATATCTGTG CAAATGTTGA TCTTTACTCA GGTTTTGTAT ATGATGCACT TGGAATTCCG
ACCGAGCTGT TCACACCTTT ATTTGCGGTT GCCAGAATAG TTGGATGGTG TGCCCACAGA
ATTGAAGAGG TAGTGTCCAT GCAAAAGATT ATAAGGCCTG CATACAAAAG TATATCAAGA
CCGAAGAAAT ACATACCTAT GGAAGAAAGA TAA
|
|---|
| Protein sequence | MEKSLNEYIE KMVGVVDCIN RIDPEYFTKY SVKKGLRNSD GSGVLVGLTE IGEVHGYFIS
EGERKEDEGH LVYRGIDVYE MVRGFQKEKR FGFEEVCYLL LFAKLPNRDE LSEFTELLGG
LRALPVGFTE DMILKAPSCD IMNKLARSVL ASYSYDDEPD GIDPKNLLRQ SIELIARFPT
MAAYGFQAKS HYYGGQSLYI HSPLPQLSTA ENILHMIRPD NKYTQTEAEI LDLALVLHAE
HGGGNNSTFA ARVVSSTETD TYSAIAAAVG SLKGPKHGGA NIKAMNMLSD IKEHVKDWTD
DDEVRNYLIK IINKEAFDKA GLIYGMGHAV YTLSDPRTIL LKEKAHQLAI EKGREKEFLL
YDAVERIAPD VFAQAKGTTK NICANVDLYS GFVYDALGIP TELFTPLFAV ARIVGWCAHR
IEEVVSMQKI IRPAYKSISR PKKYIPMEER
|
|---|
| |