Gene Ccel_2562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_2562 
Symbol 
ID7311217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp3084177 
End bp3085037 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content37% 
IMG OID643609491 
Productrod shape-determining protein MreC 
Protein accessionYP_002506870 
Protein GI220929961 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.028075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGTATT TTAAAAGCAG GGCGTTGGTT ATTACCATAA TAGTTTTAAT ACTAATTGTG 
TGCGTAGGTT TGACTGTAAA CCCGGCAAGT AATATAAACT GGATCGGAAA CTTGATTTCA
GTACCTTTTA CATCTGTTGA AAAGGCGTTT TCTTATACAG GACAGAAGGT TGAAGAAGGT
ATAAGCCTTT TTGACAATGT TCAAAAGCTG CAAGCTGAAA ACAAGGAATT AAAAGAGAAA
ATTGACAAGC TAAATAATGA AAGAACCGAA TATTTACGGC TGAAAAGGGA AAATGAAGAC
TTACGTAAAG TTTTTGATTT GAAGGATCAG TTTGCAAGCT ATGACCATGT GGGTGCAAAT
ATAATTGCTC GGGATGGCGG AAATCTGTTT AATGTTTTTC TTACTGACAA AGGTTCTGCA
AATGGGATTA ATTACAATAT GCCTGTTATT ACCAGCAAAG GTCTGGTGGG TAGAGTAGTG
TCCGCACAAC TATTTTCTTC CAAAATCATA AGTATTATTG AAGACGGTAG CTCTGTAAGT
GCTCTAGTTG CAAAAAGCGG AGACTATGTT GTAGTAAAGG GAGATATCAA GCTGGAAAAG
GAAGGCTTGT GCAAACTTGA ATATATCCCT GCAGATCTTG ACCTGATTCA GGGGGACATA
ATTCAAACAT CAGGAATCGG GGGTATATAT CCCAGGGGTA TTACAATAGG AACAGTAAAG
GAAATAAGAG CAGGGGAAAG CGATCTTGAC AGATATGCAA TCATTCAGCC AGCAGCTGAT
TTAAAGAGGC TTAATCAGGT AGTAATACTC AGAAATAAAG ATGCACAATT AAATTCAGAA
ATGGAAAATG CAGACAAATG A
 
Protein sequence
MKYFKSRALV ITIIVLILIV CVGLTVNPAS NINWIGNLIS VPFTSVEKAF SYTGQKVEEG 
ISLFDNVQKL QAENKELKEK IDKLNNERTE YLRLKRENED LRKVFDLKDQ FASYDHVGAN
IIARDGGNLF NVFLTDKGSA NGINYNMPVI TSKGLVGRVV SAQLFSSKII SIIEDGSSVS
ALVAKSGDYV VVKGDIKLEK EGLCKLEYIP ADLDLIQGDI IQTSGIGGIY PRGITIGTVK
EIRAGESDLD RYAIIQPAAD LKRLNQVVIL RNKDAQLNSE MENADK