Gene Ccel_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_2548 
Symbol 
ID7311204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp3073273 
End bp3074130 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content40% 
IMG OID643609477 
ProductPeptidase M23 
Protein accessionYP_002506856 
Protein GI220929947 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000368536 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAAA TTATTGAAAG ACCGAAATAC TCCCGACCGA CCGGTCCCCG GAGAAACAGA 
AGGAATACAA ATAATGACCT CATGTCAACA ATTGCAGCGG CAAAAATGCT GATTGTTGTG
GTTTTTCTAT CTGCAATTGC TTTGTGTAAG GCAGCAAATA CGCCTGCCAC TGATGCTTTC
GTATCACAGG TAAAGAAAAT AACTACTGTG AACTATGACG TTAATAGGTA TATTGTGAGT
GCGGCTACGA AATTAGGGGT AAAACTGCCG GAAGGAAAAG ATATAAATGG CAATGATGTT
CAGACTTCAT CAGTTGCAAA TAAAACAGAT TCAGGTGATT CGGTTAATCC GGCGTCCGAT
ACAAAAAGCA GTTCGTTATC AATAGATAGT GAGTCGGTAC CGGGTATAGA TATGCAGGTT
GTGGATGAAA TTGGAATAAA AGGAATTGCA GATAAGTACT CATTTATTAT TCCTATTAAA
GGAGAAGTAA TTTCGCCCTT TGGGACAAGG ACAGACCCAT TAAGCGGAAG TCCCCAGTTT
CATACAGGTA TTGATATAGA AGCAAATATG GGAACGTCCA TCAAAGCAGC TCTAGCGGGG
GAGGTCACTG AGGTAGGAAC AAACCCTCAA AATGACAAGT ATGTAAAAAT AAAGCACAAT
GATGGTATAA CAACACTCTA TGGACATTGT TCTATTCTGG TTGCAAAAGT AGGACAAAAA
GTAAATCAGG GAGATGTTAT TGCAAAAGTA GGGAACTCCG AGGACAAATC AAATTCAAAC
CTCCATTTTG AAGTATCAAA GGATAATAAA TTGGTTGACC CGGGAAAACT CTTTGATATT
CTGAACGGAG ATAACTAG
 
Protein sequence
MDEIIERPKY SRPTGPRRNR RNTNNDLMST IAAAKMLIVV VFLSAIALCK AANTPATDAF 
VSQVKKITTV NYDVNRYIVS AATKLGVKLP EGKDINGNDV QTSSVANKTD SGDSVNPASD
TKSSSLSIDS ESVPGIDMQV VDEIGIKGIA DKYSFIIPIK GEVISPFGTR TDPLSGSPQF
HTGIDIEANM GTSIKAALAG EVTEVGTNPQ NDKYVKIKHN DGITTLYGHC SILVAKVGQK
VNQGDVIAKV GNSEDKSNSN LHFEVSKDNK LVDPGKLFDI LNGDN