Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2548 |
Symbol | |
ID | 7311204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 3073273 |
End bp | 3074130 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643609477 |
Product | Peptidase M23 |
Protein accession | YP_002506856 |
Protein GI | 220929947 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000368536 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGAAA TTATTGAAAG ACCGAAATAC TCCCGACCGA CCGGTCCCCG GAGAAACAGA AGGAATACAA ATAATGACCT CATGTCAACA ATTGCAGCGG CAAAAATGCT GATTGTTGTG GTTTTTCTAT CTGCAATTGC TTTGTGTAAG GCAGCAAATA CGCCTGCCAC TGATGCTTTC GTATCACAGG TAAAGAAAAT AACTACTGTG AACTATGACG TTAATAGGTA TATTGTGAGT GCGGCTACGA AATTAGGGGT AAAACTGCCG GAAGGAAAAG ATATAAATGG CAATGATGTT CAGACTTCAT CAGTTGCAAA TAAAACAGAT TCAGGTGATT CGGTTAATCC GGCGTCCGAT ACAAAAAGCA GTTCGTTATC AATAGATAGT GAGTCGGTAC CGGGTATAGA TATGCAGGTT GTGGATGAAA TTGGAATAAA AGGAATTGCA GATAAGTACT CATTTATTAT TCCTATTAAA GGAGAAGTAA TTTCGCCCTT TGGGACAAGG ACAGACCCAT TAAGCGGAAG TCCCCAGTTT CATACAGGTA TTGATATAGA AGCAAATATG GGAACGTCCA TCAAAGCAGC TCTAGCGGGG GAGGTCACTG AGGTAGGAAC AAACCCTCAA AATGACAAGT ATGTAAAAAT AAAGCACAAT GATGGTATAA CAACACTCTA TGGACATTGT TCTATTCTGG TTGCAAAAGT AGGACAAAAA GTAAATCAGG GAGATGTTAT TGCAAAAGTA GGGAACTCCG AGGACAAATC AAATTCAAAC CTCCATTTTG AAGTATCAAA GGATAATAAA TTGGTTGACC CGGGAAAACT CTTTGATATT CTGAACGGAG ATAACTAG
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Protein sequence | MDEIIERPKY SRPTGPRRNR RNTNNDLMST IAAAKMLIVV VFLSAIALCK AANTPATDAF VSQVKKITTV NYDVNRYIVS AATKLGVKLP EGKDINGNDV QTSSVANKTD SGDSVNPASD TKSSSLSIDS ESVPGIDMQV VDEIGIKGIA DKYSFIIPIK GEVISPFGTR TDPLSGSPQF HTGIDIEANM GTSIKAALAG EVTEVGTNPQ NDKYVKIKHN DGITTLYGHC SILVAKVGQK VNQGDVIAKV GNSEDKSNSN LHFEVSKDNK LVDPGKLFDI LNGDN
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