Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2541 |
Symbol | |
ID | 7311199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 3065903 |
End bp | 3067081 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 643609470 |
Product | protein of unknown function UPF0118 |
Protein accession | YP_002506849 |
Protein GI | 220929940 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.407102 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTCAA ATAATAACCG CAGCCTGTTA AATAGTAAGC TGTTCAGATA CGGCTGTTAC CTGCTGCTTG CTCTTCTAAT AGTATATATG TTCGGAAAGA TAAATTTCTT TATCGCACCC TTCCAAAGCT TTGTATACTC GATAATTTTT CCGATACTTT TCGGAGGCTT ATTATACTAT ATTCTAAGAC CAATAGTTTT AATGCTTGAA AAAGGTAGGG TTCCCCATAT ATGGGCCATA CTTCTTGCTT TTGTAATTGT ATTGTCCGCT TTGATACTAT TGAGTTCCTA TACAGGGTCA ATTATTAAAT CACAGTTTAA TGACTTTGCA AAAAGTCTGC CCTATTTGTA TGAAAGTGCT GAAAATACTA TCAACAACCT GCTAAAGAGT AATTTACTCA GTTATTTTGA TTCTTCCAGT TTTCAGACCT CCGATTTAAC AGAAAAAGTA TCAAATTTCC TGCAAGGGGC AGCCAAAAGT GTAGGAAAGA ATACAATAAA CTTTATAAGT GCGATTACAA ATATCGGTTC AGTAATAATT ATCTTGCCAG TCATTCTGTT TTATTTCTTA AAGGACGGGC ATAAGTTTAT GCCCAGCATA GTAAGATTTG TTCCATCGTC ACAAAAGGAC AATATAAGAA AGATTTTAAA GGATATAGAT TTCGTACTGT CAAATTATAT TGCAGGCCAG CTTCTGGTAG CTTTTTTTAT AGGACTTCTG ATGTATATAG GCTATCTGAT TATAGGCTTG AAATACTCTT TGCTTCTGGC AATCTTTGCT ATGATAACAT GTATAATTCC ATTCTTTGGT CCATGGATTG GAATTATACC TGCCATACTG CTTTCACTGG CAGACAATCC ATTTATGGCA ATAAAGATAT TTATAGTGAT GATAATTGTT CAGCAGATAG ATAATAACTT TATTTCACCG CAGGTAATGA AAAAGAGCAT GGACATCCAT CCTCTGACAG TCATTCTGCT GTTGATGGGT ATTCTCCCCA TATTTGGTTT TATAGGCTTG ATAATAGTTA TTCCTCTATA TTCTGCAATT AAGATTACAA TTAAAAATAT AATTGAAATG TACTACCCAA AATACGCAGA AGCTCTTAAT CTTGATATGC CCAATGAAAC TGAAAAGCCG AAGAAACAAT TAAAATTTAA ATTCAAAAAA AATAAGTAA
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Protein sequence | MDSNNNRSLL NSKLFRYGCY LLLALLIVYM FGKINFFIAP FQSFVYSIIF PILFGGLLYY ILRPIVLMLE KGRVPHIWAI LLAFVIVLSA LILLSSYTGS IIKSQFNDFA KSLPYLYESA ENTINNLLKS NLLSYFDSSS FQTSDLTEKV SNFLQGAAKS VGKNTINFIS AITNIGSVII ILPVILFYFL KDGHKFMPSI VRFVPSSQKD NIRKILKDID FVLSNYIAGQ LLVAFFIGLL MYIGYLIIGL KYSLLLAIFA MITCIIPFFG PWIGIIPAIL LSLADNPFMA IKIFIVMIIV QQIDNNFISP QVMKKSMDIH PLTVILLLMG ILPIFGFIGL IIVIPLYSAI KITIKNIIEM YYPKYAEALN LDMPNETEKP KKQLKFKFKK NK
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