| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2534 |
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| Symbol | |
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| ID | 7311192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | - |
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| Start bp | 3059527 |
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| End bp | 3060777 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643609463 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_002506842 |
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| Protein GI | 220929933 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.73799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAGAAT ATTATTCAAC AATAACCGGT TTTTTTGGTA ATTCAAATCC GGAGAAGCTA
CTAAAGGAAT TCGGAAGTCC CTTATACGTT TACAACGAAA AGATATTAAG ACAGAAATGC
AGGGATATGA AGAATCTTGT AGAATACAAA AACTTTGTTC CAAATTATTC CATAAAGGCA
AACTCAAACC TTAGCTTAAT AAAAATTGTA AAGGAAGAAG GACTCAGGGC TGATGCTATG
TCCGCAGGGG AAATACAGCT TTTGCTTCAC GCAGGTTTTG AGCCTGAGGA GCTGTTTTTT
GTTCCAAACA ACGTATCAGA ATCAGAGCTA AAGTATGCAG TTGACAACGG TGTTCTGGTA
AGTGTGGATT CACTGTCACA GCTTGAACTG CTTGGGAAGA TCAATACGGG AGGAAAAGCC
GCTGTAAGGT TTAATCCGGG AGTCGGAGCA GGACACCACG AAAAGGTTGT AACAGCCGGA
AAGAAAACAA AGTTTGGAGT AAACATTGAC TGTGTAGATC AGGTAAAGGA AATTGCCGGA
AAATATAATA TGAAAATATG CGGTGTAAAC CAGCACATAG GTTCATTGTT TATGGAAGGT
GATTCGTATA TTGAAGGGGT AAAATCATTA CTGTCTGTGG CAGAACAGTT TGAGGACATA
GATTTTGTTG ATATGGGCGG AGGCTTCGGA ATTCCATATA ACAAGCAGGA AGGTCAGAAA
CCGCTTGATC TTGCTAGCTT TAAGGAAAAG CTGACACAGG TCCTTGAGCA ATGGACTGAC
AAATATGGAA AGAAGATACT GTTTAAGACC GAGCCGGGCC GTTATATAGT TGCGGAAAGT
GGAGTAATTC TGGGAAATGT ATACACGACA AAGGCTAATT ATGGAAATAA GTATGTAGGT
ACTGACATTG GATTCAATGT ACTGGCAAGA CCTGTTATGT ACGATTCACA CCATGACATA
GAAGTATATA GAAACGGAAA GCCCTTAAAT GAGGCTGAAA CTGAAGAGGT AACAGTCGTT
GGTAATATCT GTGAGAGTGG TGATATTATT GCAAAAAACA GGAAACTTCC TGTTATAAAG
GAAGGAGATA TCCTTGGAAT AATGGATGCA GGTGCCTACG GCTTTGCAAT GAGTTCAAAC
TACAACATGA GGCTTAGACC TGCAGAAGTG CTAATTAAGG AAGATGGAGA GCCTACGTTG
ATAAGACGCA GGGATACTTT TGAGGACTTG ATAGCAAACT TCAATATATA A
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| Protein sequence | MTEYYSTITG FFGNSNPEKL LKEFGSPLYV YNEKILRQKC RDMKNLVEYK NFVPNYSIKA
NSNLSLIKIV KEEGLRADAM SAGEIQLLLH AGFEPEELFF VPNNVSESEL KYAVDNGVLV
SVDSLSQLEL LGKINTGGKA AVRFNPGVGA GHHEKVVTAG KKTKFGVNID CVDQVKEIAG
KYNMKICGVN QHIGSLFMEG DSYIEGVKSL LSVAEQFEDI DFVDMGGGFG IPYNKQEGQK
PLDLASFKEK LTQVLEQWTD KYGKKILFKT EPGRYIVAES GVILGNVYTT KANYGNKYVG
TDIGFNVLAR PVMYDSHHDI EVYRNGKPLN EAETEEVTVV GNICESGDII AKNRKLPVIK
EGDILGIMDA GAYGFAMSSN YNMRLRPAEV LIKEDGEPTL IRRRDTFEDL IANFNI
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