| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2521 |
|---|
| Symbol | |
|---|
| ID | 7311181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 3043868 |
|---|
| End bp | 3044656 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643609450 |
|---|
| Product | protein of unknown function DUF990 |
|---|
| Protein accession | YP_002506829 |
|---|
| Protein GI | 220929920 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4587] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCCT ATGTGGAGTT CGCTAAAAAA GCATTCCAGA ATAATATTGC ATACAGGGCA
GATTGTGTAG CAGGTATTAT AAATGCCATA ATCATGATAT TTGTCAACAT ATGTGTCTGG
AAAGCAATCT ATGAGGACGA ACAAGCTGTA GCCGGTGTGC AGTTCAAAAT GCTGATAACC
TATGTAGTTC TTGCCTTTCT GATGCAATGT ATTTATGCTA TGGATGAATA CCGAATTGAA
AACAAGGTAC GATCGGGCTC TATAGGATTG GATTTACTCA AGCCTATTAA TTTCAGCGGC
TATACTTTTT CATATAATGT AGGTATCTTG ATTTTCAGGG TTGTTATGCA ACTTACACCC
GCACTAATCA TATCCATATT TCTATTTAAA ATGCTTCCGC CTTTTTCGTT AACAATGTTC
GCACTTTTTT TGGTTAGTAT GATTTTAGGT TACCTTGTAT TGTACTGCTT GAACTTCATA
GTATGGATAA GCTCATTCTG GTTCTATTGG ACTTTCAGCC TTGTAACAAT AAAGGACGCA
GCGGTAATGA TATTGTCAGG GGCACTGCTT CCTCTGTGGT TTATGCCCCA GGCAATGGTG
GATTTTATTA ATCTTACTCC CTTTGCTTCC ATATATTATG TACCCATTAC TATTTATCTG
GGACAAATGC CAATGGAGGA AATAGCTTTT GCACTTATAA AACAGCTTAT ATGGGCACTG
GGCTTGTTTA TAATAGGCAG GCTCCTATGG AGGTCAGCAT TGAAAAAATT GGTTGTACAG
GGGGGATAG
|
|---|
| Protein sequence | MRAYVEFAKK AFQNNIAYRA DCVAGIINAI IMIFVNICVW KAIYEDEQAV AGVQFKMLIT
YVVLAFLMQC IYAMDEYRIE NKVRSGSIGL DLLKPINFSG YTFSYNVGIL IFRVVMQLTP
ALIISIFLFK MLPPFSLTMF ALFLVSMILG YLVLYCLNFI VWISSFWFYW TFSLVTIKDA
AVMILSGALL PLWFMPQAMV DFINLTPFAS IYYVPITIYL GQMPMEEIAF ALIKQLIWAL
GLFIIGRLLW RSALKKLVVQ GG
|
|---|
| |