Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2451 |
Symbol | |
ID | 7311121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2959323 |
End bp | 2961383 |
Gene Length | 2061 bp |
Protein Length | 686 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643609381 |
Product | Glycoside hydrolase family 42 domain protein |
Protein accession | YP_002506760 |
Protein GI | 220929851 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1874] Beta-galactosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.987943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAT ATATGCCTAT TGGTATGAAT TTTCCACATA TTCTGCATGG TGGAGACTAT AATCCGGATC AGTGGTTGAA GGCGCCAAAG ATATTGGATG AAGATTTTCG TCTTATGAAG CTTGCACATT GTAATGTAAT GACTATAGGA ATTTTTTCGT GGATGGCATT GGAGCCGGAA GAGGGGAAGT TTGATTTTAG TTGGCTGGAC GAAATTATGG ATAAACTTTC TAAAAACGAA ATGACCGCCA TTCTGGCTAC CCCAAGCGGT GCAAAACCCT CGTGGATGTC GCAAAAGTAC CCGGAAATAT TGCGTACTCA GGCGGACAGG CTAAAGGATT TCCATGGCGG ACGTCATAAC CATTGCCTTA CATCCCCCAT TTACCGTAAA AAGGTAAGCC AAATCAACCG TTTGCTGGCA GAGCGGTATG CAAGGCATCC TGCACTAATT TTATGGCATA TCTCAAATGA GTACAGCGGG GAATGTCATT GTCCATTATG TCAGGAAGCG TTCCGCAGTT TTCTTATGAA AAAGTACGAG GGTGACCTCG AGCGGCTTAA CCATGAGTGG TGGACGGGTT TCTGGGCACA CCGATATACA GATTGGTCAC AAATAGAGTC ACCATCTCCC CGGGGTGAGC ATGAGACTCA TGGACTTATT CTGGACTGGA AGAGGTTTGT CTCACACCAG ACAATTGATT TTTTAAAAAA CGAGATTAAA CCTCTGCGGG AGCTGACACC GGAAATTTCC GTCACTACCA ACCTGATGGG AACCTTTCCG GGTTTAGAAT ACCGGGAACT TTCAAAAGAG ATTGACGTAG TTTCATGGGA TAATTACCCG ACTTGGCATA CCTCGGAGCA GCCGGATTGG AAAATAGGCA TACGAACCTC CTTTGTCCAT GATATCAACA GGTCTCTTAA GCAGGGCAAG CCGTTTATGA TGATGGAAAG TACACCCAGT ACGGTTAACT GGCAAAAAGT AAACAAACTC AAACGTCCCG GTATGCATAT GTTATCTTCA CTTCAGGCAG TTGCTCATGG CAGCGATACA GTTCAGTATT TTCAGTGGAG AAAATCAAGA GGAAGTTTTG AAAAATTTCA TGGTGCGGTG GTAGATCATG TTGGTCACGA GAATACCCGT GTTTTCCGGG AGGTTGCACA AGTAGGGCAA GTTCTTGAAA AGCTGGATGA GGTGGTGGGA ACAACGGTTC ATCCAAAGGT TGCTATCATA TTCGACTGGG AAAATCGGTG GGCTATGGAG GAGGCACAGG CTCTTGCACG TGACAGGATA AAGTACGAGG AAACCTGTGT CGCACATTAT ACAGCCTTCT GGAAACGAGG TGTATCTGTA GACATTATAG GTGCAAGAGA TAATTTATCA CAGTATAAAC TAGTTATTGC ACCAATGCTC TATCTGACCC ATCCCGGTGT CGGAGAGCGT ATAGAGACAT TTGTAAATGA GGGAGGTACC TTTGTTGCCA CCTATTGGAG TGGAATTGTA AATGAAAATG ACCTATGTCA TTTGGGCGGA TTTCCGGGTC CGCTGCGTGC AGTTACAGGT ATTTGGAGTG AGGAAATAGA TACTATGCAC CCGGATGAAA ACAATAGTCT CATACTGAGT GATAACTCTC TGGGTCTCTC AGGGACTTAT AGGGTACAAG ATTTCTGTGA TCTGGTTCAT GCCGAATCCG CAGAGGTTCT GGCTCGGTAT GGAGAGGAGT TTTATGCGGG TAGGCCTGCA CTGACAGTTA ACCGTTTTGG AAAGGGGAAT GCCTACTATA TGGCAGCCCG TACAGGAGAA GATTTCCTTG AGGATTTTTA TAATGCCCTT ATGAAAAAAC TAACACTATC ACGTACACTG GACGTTGAAC TACCATGCGG AGTGACAAGC CAGCTTCGTA CAGATGGGCA AAACCGCTAC ATATTTCTTA TGAACTTCAA TCACGAAAAA CAAGATATTC AGCTTACTAA AGGTTTAACG GATATGTTCA CTGGAGAAAT CAGGCAGGGG ATGCTGGAAC TTGCTCCTTT TGACGTAAAA GTGCTAAAAG CTAAAATATA G
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Protein sequence | MDKYMPIGMN FPHILHGGDY NPDQWLKAPK ILDEDFRLMK LAHCNVMTIG IFSWMALEPE EGKFDFSWLD EIMDKLSKNE MTAILATPSG AKPSWMSQKY PEILRTQADR LKDFHGGRHN HCLTSPIYRK KVSQINRLLA ERYARHPALI LWHISNEYSG ECHCPLCQEA FRSFLMKKYE GDLERLNHEW WTGFWAHRYT DWSQIESPSP RGEHETHGLI LDWKRFVSHQ TIDFLKNEIK PLRELTPEIS VTTNLMGTFP GLEYRELSKE IDVVSWDNYP TWHTSEQPDW KIGIRTSFVH DINRSLKQGK PFMMMESTPS TVNWQKVNKL KRPGMHMLSS LQAVAHGSDT VQYFQWRKSR GSFEKFHGAV VDHVGHENTR VFREVAQVGQ VLEKLDEVVG TTVHPKVAII FDWENRWAME EAQALARDRI KYEETCVAHY TAFWKRGVSV DIIGARDNLS QYKLVIAPML YLTHPGVGER IETFVNEGGT FVATYWSGIV NENDLCHLGG FPGPLRAVTG IWSEEIDTMH PDENNSLILS DNSLGLSGTY RVQDFCDLVH AESAEVLARY GEEFYAGRPA LTVNRFGKGN AYYMAARTGE DFLEDFYNAL MKKLTLSRTL DVELPCGVTS QLRTDGQNRY IFLMNFNHEK QDIQLTKGLT DMFTGEIRQG MLELAPFDVK VLKAKI
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