Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2417 |
Symbol | |
ID | 7311085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 2917915 |
End bp | 2919891 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643609343 |
Product | glycosyl transferase family 39 |
Protein accession | YP_002506727 |
Protein GI | 220929818 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1928] Dolichyl-phosphate-mannose--protein O-mannosyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAACGT ATTTAAAAAA TATTTTGAAC TTTTTTTCAC ATGTTAAAAT GCCGGGCTTT GCAACAATGA TGTCGAGTGT TATTATACTA TTTTTTATAG GCATAGGGAT ATGGGGTTTT TCAAGAATCC GCAACATCCA AAAGGGTAAT TTGATAATTA CTGAATATGG TCTACTAGAC AACGAAAAAG AAAAAAAGCC TTTGTTTAAG CTTGTTAAAA AAGATTATAT TATTATGCTT GTTATGACTT TATTATACGC TATTCCTGCA ATATATAACC TGGGCGGTTT TAAGATACCT GAGACACCAT GGGCTCCTGC TGAAAAGAAT GACGGGTTTA TTGTTGACCT TGGAAAAGAA GTTGATGTAA CAAAAGTTAT GATTTATCAA GGATATAATG AAGAAAAATA TGACGGTGTC AAGTTCAATA TTAAGTTTTT AAATTCAAAC GATACATATT CGGACTCTGA GGCCCTTGAG AAATCAGGTT TTTTTTCATG GAAGGTATCT ACTAAGGAAT TTAAAACCAG TAAAATCAAA ATAATTGCCG ATAAACCCGG TTCAGCAATT AATGAGCTTG CTATTTTCGA AAAAGGTTCA ACAAAGCCAT TTAAAGTCAT GAGTATAACC TCTGTCGATC CATTAATAAA AAGTTCTATT AAAAGTCCTG ACGGGAAGCC TTATAAATTA AGCAACCTGA TTGACGAGCA AGATAGAGTT GATTTGTATA CTTTATCAGC TACCAATACC TATTTCGATG AAGTATTTTA CCCAAGAACT GCTCTTGACT TCATTAATAA AATCCACCCT TTTGAAAGAA CCCATCCACC CCTAGGCAAA TACTTCGTTA TGATAGGAAT GCTTATTTTT GGTGTAAACC CATTCGGGTG GAGAATTATC GGTACATTAT TCGGAGTAGC TATGATTCCT CTTATGTACT TGTTTGGTTA TAAGATATTC AAAAAAAGGT TTCTTGCATT TTGTACTGCT TTTTTGATGA TGTTTGACTT TATGCACTTT GTTCAGACAA GAATATCGAC AATTGATGTA TATGTAACCT TCTTTGTTAT TTTAATGTAC TACTACATTT ACGACTATTT TGTTAAAAAA TCATACAAAG CTGGCCTTAA AAGATCCCTT GTGCCGCTTT TCCTCTGCGG CCTTGCTTTC GGTATAGGGA TTGCTACCAA ATGGATAGCA ATGTATGCCG CTGTGGGTAT TTTTCTTATA CTAGTCATTG CCAAGCTCGA CGAAATCGTT TATTACACAG CATACAAAAA GAGCGGGCTT TCGTCTGACT TATTTAGTAA ATTCTGGAGT AAGTACTTTT TTAAAACTGC ATTATTTTGT ATTTTGTTTT TTATATTAAT ACCCGGTATA ATCTATTTCG CTTCATATAC ATCCATAATG CAGGTTCCGG ATAATGGGAT TAAAGAGTTT TTCAACAATC AGTCTTTTAT GTATAGTTTT CATAACGATT TGAATGCAAA ACATTCATAT TCTTCCCAGT GGTTTGAATG GCCGATAATG ACTAAGCCTA TATGGTTTTA TGGTTCAAAA GCACTTGCTG CGGAAAAATT AACTTCCAGC ATCATTTGTA TGGGGAACCC GCTAATATGG TGGATAAGCA TACCATCACT GATCACAGGA ATTATTGTTG CAATCAAAAG AAAAGACAAA TATATGCTCG TTCCTATTTT TGGTGCTCTA TTCCAGTATA TTCCTTGGAT GGTGGTACGC AGAATGGCAT TTATATATCA TTACTTTTCG GTTATACCTT TTATTATAAT TATCATTGTA TACTTAATTA AAGTATTCAT GGAGCTTGGC GGGAATACAA AAAAGATTGT ATGTACCTAT CTTGTATTGA CAGCAATAGT ATTTATAATG TATTATCCGA TTTTATCCGG CATGATTGTA CCCAGGTGGT ATGCCAGCTT GCTGCAATTG TTCCCGGGCT GGAGTTTCAG ATATTAA
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Protein sequence | METYLKNILN FFSHVKMPGF ATMMSSVIIL FFIGIGIWGF SRIRNIQKGN LIITEYGLLD NEKEKKPLFK LVKKDYIIML VMTLLYAIPA IYNLGGFKIP ETPWAPAEKN DGFIVDLGKE VDVTKVMIYQ GYNEEKYDGV KFNIKFLNSN DTYSDSEALE KSGFFSWKVS TKEFKTSKIK IIADKPGSAI NELAIFEKGS TKPFKVMSIT SVDPLIKSSI KSPDGKPYKL SNLIDEQDRV DLYTLSATNT YFDEVFYPRT ALDFINKIHP FERTHPPLGK YFVMIGMLIF GVNPFGWRII GTLFGVAMIP LMYLFGYKIF KKRFLAFCTA FLMMFDFMHF VQTRISTIDV YVTFFVILMY YYIYDYFVKK SYKAGLKRSL VPLFLCGLAF GIGIATKWIA MYAAVGIFLI LVIAKLDEIV YYTAYKKSGL SSDLFSKFWS KYFFKTALFC ILFFILIPGI IYFASYTSIM QVPDNGIKEF FNNQSFMYSF HNDLNAKHSY SSQWFEWPIM TKPIWFYGSK ALAAEKLTSS IICMGNPLIW WISIPSLITG IIVAIKRKDK YMLVPIFGAL FQYIPWMVVR RMAFIYHYFS VIPFIIIIIV YLIKVFMELG GNTKKIVCTY LVLTAIVFIM YYPILSGMIV PRWYASLLQL FPGWSFRY
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