Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2393 |
Symbol | |
ID | 7312358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2876269 |
End bp | 2877837 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643609318 |
Product | S-layer domain protein |
Protein accession | YP_002506706 |
Protein GI | 220929797 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000002124 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TTATGAAAAA GTTTGCGGTG TTGTTAATAG GTGCAACACT AATTCTATCA GGAATCAACA CGCAATATGT GTCTGCGGCA GGGTTCAAAG ATGTCAAGTC TACTGATTGG TACTATTCAT CAGTTAACCG ACTTGTAAAT TCGGGAATAA CATCAGGAGT CGGAAGTAAT AGTTTTGGGC CTGAAAAAAT TGTAACACGT TCAGAGATGG TAACATTCCT GTGCAAGGCG ATAGGTTTAA CACCATCAGA TGGAGATACC TTTCTTGATA TAACAAAACA CTGGGCAAAG AAATGGATTA CAGCAGCGGT TACAGCAAAT ATAATAGACC AGGGAGAAAT ATTTGGCCCG GACGAGGCTA TTACAAGACA GGAAGCTACA GAGATGCTTT GCAGGGCACT GGGTTTATCC GCAGAAACTT TAAATGAAAC TCCGTTTTGT GATATAACCA CTGATACAGG ATATTGTACG AGAGCCTTTG AAGAATACCT TATGCTGGGT TCGGTCAAGG ATAATGAAAG ATATTTCTAT CCGTTTAGTT TCCTCAAAAG AAGTGAAGCA GCTGCTATAA TAGTAAATCT TTTAGATTAT AAGTCAGATA AGGACAGCTT TAAAGCACAA AAGAAGGTTC TTTTGGATAA GCAGGAAAAA GAAACGCCTA CTACTAAAAA AATACAACAG ATAGAAGTAA CCGTTAGTAC ACCGGACGAA CTGATTAAGC AAATAGGATC TAATAAGAGA ATTCTCTTAA AACCCGGTGT ATATAATTTG TCATCAATCA AGCAACTTGA CAATAAAGAT AAAACAGTTA CCTGGAGACA GGTTGATGAT GGTAAAGAAT TAAACCTTAG TGGTATTCAT AACCTGACAA TTGAAGGTAT AAATAATCAA ACAGCTGAAA TAAAGGTAAA CCCAAGATAT GCAGAGATTA TAAACTTTAA TTATTGTAAA AATATTACTT TAAAAAACAT AAAAGCAGGT CACACGCCGA GCGAATACAC ATGTAATGCC GGAGTGCTGT CTTTTACGAA TTGCAGTGAC ATAGAAGTAA ATAATTCAGA GCTTTATGGG TGTGGGAGTG TAGGTATATC AGCATATAGC ACAAAACGAT TAAATTGCGT AGACACGATA ATTAACCATT GCTCATTAAG GGCAATTAAC CTATCTAAAT CTGAAAAAAT TAATTTCACA GGGTGTAAAA TATTAAATCA TGAGGCATAT AGCAATATTG TGAATATTTA TAGTTCAAAG GAAGTTACCT TTGAAAAGTG TGAATTCACT GACAACAACA ATTTTGAATG GGGATTCTTT GAAGTGTGGC AGAATACGGA GTTATTAATA GACAAGTGCA AGATAGTGAA CAATTTTCAA CCTAGATATG ATACACAGGA TGCCAGTGCA TATTTCTTTA AAACACAGGA ATTTGACGGA GTCAGCACAA GCAAAATTAC AGTTAAAGAT ACTGAAATCA CAAACAATAG ATGTGATTAT TTGTGTGATG ATAAAAATTC TGTCACTTTT GAGAACTGTA CAATAAGTGG GAATGAGTGG GAAGAATGA
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Protein sequence | MKKFMKKFAV LLIGATLILS GINTQYVSAA GFKDVKSTDW YYSSVNRLVN SGITSGVGSN SFGPEKIVTR SEMVTFLCKA IGLTPSDGDT FLDITKHWAK KWITAAVTAN IIDQGEIFGP DEAITRQEAT EMLCRALGLS AETLNETPFC DITTDTGYCT RAFEEYLMLG SVKDNERYFY PFSFLKRSEA AAIIVNLLDY KSDKDSFKAQ KKVLLDKQEK ETPTTKKIQQ IEVTVSTPDE LIKQIGSNKR ILLKPGVYNL SSIKQLDNKD KTVTWRQVDD GKELNLSGIH NLTIEGINNQ TAEIKVNPRY AEIINFNYCK NITLKNIKAG HTPSEYTCNA GVLSFTNCSD IEVNNSELYG CGSVGISAYS TKRLNCVDTI INHCSLRAIN LSKSEKINFT GCKILNHEAY SNIVNIYSSK EVTFEKCEFT DNNNFEWGFF EVWQNTELLI DKCKIVNNFQ PRYDTQDASA YFFKTQEFDG VSTSKITVKD TEITNNRCDY LCDDKNSVTF ENCTISGNEW EE
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