| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2317 |
|---|
| Symbol | |
|---|
| ID | 7310993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 2700123 |
|---|
| End bp | 2700764 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 643609245 |
|---|
| Product | type IV pilus assembly PilZ |
|---|
| Protein accession | YP_002506633 |
|---|
| Protein GI | 220929724 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGT TTAACTTGGT ATTAAGACAT TATAATAAAG TCAAGCCTAT GAACTGTGAA
ATAGTAAGTG GTGATACGAA AAAAGTATTT ACTGTTAAAT TATGCAATGA GGAAAAAAAT
GGTGCCGAAA TTATCAAGGG AGACCCCGTG CTTATAGGAT TTCTCAATAG TGACGAAACT
CTTTATTTAA GCGGAGGCAA TGTAGTAGGT GCCATACCGA ATGAGGAAGA ATACATAATA
CACTCAAACA ATCCAGAAAA TATAGCTTTT GAAACTGAAA GAAGACAGTA CGAAAGATTT
CCTACATCTC TGATTGGTGA AATGAAGCTT GTAGATTTCA ATAAAAGAGA ACCAGTATGT
ATAAAAGACT TCAGCTATGC AGGGATGTGC CTGTATTCAA CAGATGACTT CAATAAGGAT
GATGAAGTAG AAATTAGTGT GTTTCTCAGT AACAGCGTTA TTAAATATGA TGCAACGATA
GTAAGAAAAA CAGTTAGATT TGGTAGGTTT GAGTATGGTA TACAGTTGAC GCACAGAGAT
AAAAATTCAA TGTATTATAC CCAGAATCAA CTGACATCCT TTATACTAAG TGAAAAGGAG
ATAATGTACA GGCATTTGCT TAATGCAAAG CTTAAACTGT AA
|
|---|
| Protein sequence | MDKFNLVLRH YNKVKPMNCE IVSGDTKKVF TVKLCNEEKN GAEIIKGDPV LIGFLNSDET
LYLSGGNVVG AIPNEEEYII HSNNPENIAF ETERRQYERF PTSLIGEMKL VDFNKREPVC
IKDFSYAGMC LYSTDDFNKD DEVEISVFLS NSVIKYDATI VRKTVRFGRF EYGIQLTHRD
KNSMYYTQNQ LTSFILSEKE IMYRHLLNAK LKL
|
|---|
| |