Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2300 |
Symbol | |
ID | 7310978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2682935 |
End bp | 2684659 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643609229 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_002506617 |
Protein GI | 220929708 |
COG category | [R] General function prediction only |
COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.252887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATTA TTCAATTTAA AGAAGCAAAC TGCAAAAACT GTTATAAATG TATACGAAGC TGTCCTGTAA ACGCTATTGC TTTTAAAAAC GACCAGGCTG AAATCATTCA TGACGAGTGT ATGCTGTGCG GTAATTGCCT TACAGTATGT CCCCAGAATG CAAAAAGCGT TAACAGCGAT GTTCAAAAGG TAAAAAAATT TATACAGAAG CGTGAAAAAG TTTACGTAAG TCTTGCACCC TCATTTATTT CAGCATTTGA TCATGATGAA AAATGGGTTT ATTATGCCCT GAAAAAGCTG GGATTTACAC ATGTGGAAGG AACAGCCAAT GGTGCTTATC AGGTATCAAG ACAGTATGAA AGTCTTTTGA AGCAGAGAAA AATGAAGAAT ATCATAACAA GCTGCTGCTC ATCAATAATA CTACTTATTG AAAAATATTA TCCTCAGCTG TTGGATCAGC TTGCACCGGT GGTTTCTCCC ATGATAGCAC ATGCAAAAAT GCTCAGGGAA ACGTACGGAC AAAGAATCAG GGTAGTATTT ATAGGACCTT GCATTTCGAA GAAAGAAGAG TTTGATGATC TCCAAAACGG AAATCAGATT GATGCGGTAT TAACTTTTGA TGACCTTGAT AAGTGGTTTG AAGAAGAAGG TTTGTACGAA TCAGATGAGC CTATTGTCGG TATAAAAAAT TTTGATACTT CAGCGAGAAT ATATCCAATA CCGGGCGGAA TCTTAAAAAC AATTGACAGA AAATACAAAA AAAATTACAG ATCCATTAGT GTAGACGGTG TTGAACGATG TATGGATGTT CTTCAATCTA TATTAGAAGG TGACATTGAA AATTATTTCA TAGAAATGAG CAGTTGCAAA GGAGGCTGTT TGGGCGGACC GTATATGAAA AATGTACCTG GAGGATTCCT TACAGCAAGA GAGAGACTGT TGAACTATGC AAAACGCACA GGCATTAAAA CGGAGACGGA TTTGACAAGC TCTGTAATGG CTTTGACAAA GGTGGATTTA TCAAAGAAAT TTATTGATAG GTCAAAGAAA CTTGAAATAC CATCGGAAGC AGTGATACAA GGTATTTTAA ATAGTATTGG AAAATTCAGC AAGGATAAGG AGCTTAACTG CGGGGCTTGT GGTTATCACT CTTGCAGGGA AAAGGCTATA GCTGTATTCC ATGGTAAAGC ACAGGTTCAT ATGTGCCTGC CGTACATGCG GGAAAGGGCT GAGTCTATTT CAAATATCAT TATAAATTAC ACACCATATG CAATTTTTGC ACTGGATGAG GGGCTTAAAA TACAGGAACT TAACGAGCCG GCCCAGCAGA TGTTCAATTT GGGGGCTACA AACATGAATG GCAGATGTAT TTCGGAAATA CTTCCATGTG ATGAGTTTGA GCAGGTATTG GAAGGTGCTA AAAATGTGTA TGATGAGAAA TATGTTTACG AAAGTTACGG TATGGTAGTA AAACAGTCCA TTATAAATGT AAAACAGCAT AATACTGTTA TAGTTATAAT AAATGATATT ACAAAAGAGG AGGCTCAGAG GCAGAAAATT CTGGAAAGTC GTTCTCAGAA TATAGATATT GCTCAAAAAA TTATGGAAAA ACAAATGACG GTGGCTCAAG AGATTGCAAG TCTTCTTGGT GAAACTACTG CAGAAACAAA GGTGGCATTA ACCAAGCTTA AAAAATCCTT CATGTCAGAG ATGGGTGAAT TATAG
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Protein sequence | MSIIQFKEAN CKNCYKCIRS CPVNAIAFKN DQAEIIHDEC MLCGNCLTVC PQNAKSVNSD VQKVKKFIQK REKVYVSLAP SFISAFDHDE KWVYYALKKL GFTHVEGTAN GAYQVSRQYE SLLKQRKMKN IITSCCSSII LLIEKYYPQL LDQLAPVVSP MIAHAKMLRE TYGQRIRVVF IGPCISKKEE FDDLQNGNQI DAVLTFDDLD KWFEEEGLYE SDEPIVGIKN FDTSARIYPI PGGILKTIDR KYKKNYRSIS VDGVERCMDV LQSILEGDIE NYFIEMSSCK GGCLGGPYMK NVPGGFLTAR ERLLNYAKRT GIKTETDLTS SVMALTKVDL SKKFIDRSKK LEIPSEAVIQ GILNSIGKFS KDKELNCGAC GYHSCREKAI AVFHGKAQVH MCLPYMRERA ESISNIIINY TPYAIFALDE GLKIQELNEP AQQMFNLGAT NMNGRCISEI LPCDEFEQVL EGAKNVYDEK YVYESYGMVV KQSIINVKQH NTVIVIINDI TKEEAQRQKI LESRSQNIDI AQKIMEKQMT VAQEIASLLG ETTAETKVAL TKLKKSFMSE MGEL
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