Gene Ccel_2300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_2300 
Symbol 
ID7310978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2682935 
End bp2684659 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content37% 
IMG OID643609229 
Productputative PAS/PAC sensor protein 
Protein accessionYP_002506617 
Protein GI220929708 
COG category[R] General function prediction only 
COG ID[COG4624] Iron only hydrogenase large subunit, C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.252887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTA TTCAATTTAA AGAAGCAAAC TGCAAAAACT GTTATAAATG TATACGAAGC 
TGTCCTGTAA ACGCTATTGC TTTTAAAAAC GACCAGGCTG AAATCATTCA TGACGAGTGT
ATGCTGTGCG GTAATTGCCT TACAGTATGT CCCCAGAATG CAAAAAGCGT TAACAGCGAT
GTTCAAAAGG TAAAAAAATT TATACAGAAG CGTGAAAAAG TTTACGTAAG TCTTGCACCC
TCATTTATTT CAGCATTTGA TCATGATGAA AAATGGGTTT ATTATGCCCT GAAAAAGCTG
GGATTTACAC ATGTGGAAGG AACAGCCAAT GGTGCTTATC AGGTATCAAG ACAGTATGAA
AGTCTTTTGA AGCAGAGAAA AATGAAGAAT ATCATAACAA GCTGCTGCTC ATCAATAATA
CTACTTATTG AAAAATATTA TCCTCAGCTG TTGGATCAGC TTGCACCGGT GGTTTCTCCC
ATGATAGCAC ATGCAAAAAT GCTCAGGGAA ACGTACGGAC AAAGAATCAG GGTAGTATTT
ATAGGACCTT GCATTTCGAA GAAAGAAGAG TTTGATGATC TCCAAAACGG AAATCAGATT
GATGCGGTAT TAACTTTTGA TGACCTTGAT AAGTGGTTTG AAGAAGAAGG TTTGTACGAA
TCAGATGAGC CTATTGTCGG TATAAAAAAT TTTGATACTT CAGCGAGAAT ATATCCAATA
CCGGGCGGAA TCTTAAAAAC AATTGACAGA AAATACAAAA AAAATTACAG ATCCATTAGT
GTAGACGGTG TTGAACGATG TATGGATGTT CTTCAATCTA TATTAGAAGG TGACATTGAA
AATTATTTCA TAGAAATGAG CAGTTGCAAA GGAGGCTGTT TGGGCGGACC GTATATGAAA
AATGTACCTG GAGGATTCCT TACAGCAAGA GAGAGACTGT TGAACTATGC AAAACGCACA
GGCATTAAAA CGGAGACGGA TTTGACAAGC TCTGTAATGG CTTTGACAAA GGTGGATTTA
TCAAAGAAAT TTATTGATAG GTCAAAGAAA CTTGAAATAC CATCGGAAGC AGTGATACAA
GGTATTTTAA ATAGTATTGG AAAATTCAGC AAGGATAAGG AGCTTAACTG CGGGGCTTGT
GGTTATCACT CTTGCAGGGA AAAGGCTATA GCTGTATTCC ATGGTAAAGC ACAGGTTCAT
ATGTGCCTGC CGTACATGCG GGAAAGGGCT GAGTCTATTT CAAATATCAT TATAAATTAC
ACACCATATG CAATTTTTGC ACTGGATGAG GGGCTTAAAA TACAGGAACT TAACGAGCCG
GCCCAGCAGA TGTTCAATTT GGGGGCTACA AACATGAATG GCAGATGTAT TTCGGAAATA
CTTCCATGTG ATGAGTTTGA GCAGGTATTG GAAGGTGCTA AAAATGTGTA TGATGAGAAA
TATGTTTACG AAAGTTACGG TATGGTAGTA AAACAGTCCA TTATAAATGT AAAACAGCAT
AATACTGTTA TAGTTATAAT AAATGATATT ACAAAAGAGG AGGCTCAGAG GCAGAAAATT
CTGGAAAGTC GTTCTCAGAA TATAGATATT GCTCAAAAAA TTATGGAAAA ACAAATGACG
GTGGCTCAAG AGATTGCAAG TCTTCTTGGT GAAACTACTG CAGAAACAAA GGTGGCATTA
ACCAAGCTTA AAAAATCCTT CATGTCAGAG ATGGGTGAAT TATAG
 
Protein sequence
MSIIQFKEAN CKNCYKCIRS CPVNAIAFKN DQAEIIHDEC MLCGNCLTVC PQNAKSVNSD 
VQKVKKFIQK REKVYVSLAP SFISAFDHDE KWVYYALKKL GFTHVEGTAN GAYQVSRQYE
SLLKQRKMKN IITSCCSSII LLIEKYYPQL LDQLAPVVSP MIAHAKMLRE TYGQRIRVVF
IGPCISKKEE FDDLQNGNQI DAVLTFDDLD KWFEEEGLYE SDEPIVGIKN FDTSARIYPI
PGGILKTIDR KYKKNYRSIS VDGVERCMDV LQSILEGDIE NYFIEMSSCK GGCLGGPYMK
NVPGGFLTAR ERLLNYAKRT GIKTETDLTS SVMALTKVDL SKKFIDRSKK LEIPSEAVIQ
GILNSIGKFS KDKELNCGAC GYHSCREKAI AVFHGKAQVH MCLPYMRERA ESISNIIINY
TPYAIFALDE GLKIQELNEP AQQMFNLGAT NMNGRCISEI LPCDEFEQVL EGAKNVYDEK
YVYESYGMVV KQSIINVKQH NTVIVIINDI TKEEAQRQKI LESRSQNIDI AQKIMEKQMT
VAQEIASLLG ETTAETKVAL TKLKKSFMSE MGEL