Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2299 |
Symbol | |
ID | 7310977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2681763 |
End bp | 2682935 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643609228 |
Product | protein serine/threonine phosphatase |
Protein accession | YP_002506616 |
Protein GI | 220929707 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.12742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCTGT ATATTGATGT AAGTTACGAA AGTATAAATA AATATAATGA AGAATTATGT GGAGACAAGG TTGAAATAAT TCGAAGTCCG GATTCCGTTG TCGTTGTTTT GGCTGACGGT CTTGGAAGCG GTGTAAAAGC AAATATACTT GCAACACTGA CGTCTAAGAT CATAGGTACC ATTATGTCAA ACGGTCTGGA TATAGAAGAA GCTGTAAATA CGGTTGCCAA AACTCTTCCT GTTTGCAAGG AGAGAGGGGT TGCGTATTCA ACTTTTTCCA TAATACAGAT ATTCAATAAT GGCGAAGGAT ATCTGGCAGA ATTTGACAGC CCATCAGTAA TAAGGCTGCG CAAAGGCAAG GTAATGAATC TTGAAACAGA GAGCAGGGTT GTGAATGATA AGCTAATAAA AGAAGCCAGG TTCAAAGTCA GTCCTGATGA CTTATTTGTT ATGATAAGTG ATGGTGTTAT ACATGCAGGA ATAGGCCAGA CACTGAATCT AGGCTGGCAG TGGGACAATG TATGCGAGTA TATACAAAAA ACTTATAAAA AGGATGCATC CTCAAAAACA TTGGCAAAAC TACTTTTATC CGCCTGTGAC AACCTTTATG TTCATGAGCC CGGAGATGAC ACTACAGTTG TAACTCTTAA AGCAAAAAAA CCTGTGAAGC TGAACCTGAT GATCGGGCCT CCTGTAGACT CTTCACGTGA TGAGGAGATT GTATCCCGAT TTATAGAAAA TGAAGGGAAA AAGGTTGTAT GCGGCGGTAC TACTTCCCAT ATCGTTGCCA GAGTATTGGG AAAGGAAATT AAGACATCCA TAGAATATTT TAATCCTGCA GTTCCTCCTA CAGCAGAGAT AGAAGGTATC AACCTGACAA CAGAAGGTGT ACTGACTTTG AGAAAAACAC TTGATTTACT TAAAACTTGC GTTTCACCAG AGAGCAGTAT GGGAGATATG CTGAAGCTGA ACAAAAAGGA CGGTGCTTCA AGGTTGGCCA AAATGCTCCT TGAAGAGAGT ACCAGTATAT ATTTTTTTGT GGGAAGAGCT ATGAATCCGG CACACCAGAA TCCTGAATTT CCCCTTAACA TGGGAATGAA ATTTAAGCTG GTGGAAGAAT TGGCAGAACT GCTTACACAT ACCGGAAAAC ACATCAGTAT AGAGTATTGC TAG
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Protein sequence | MSLYIDVSYE SINKYNEELC GDKVEIIRSP DSVVVVLADG LGSGVKANIL ATLTSKIIGT IMSNGLDIEE AVNTVAKTLP VCKERGVAYS TFSIIQIFNN GEGYLAEFDS PSVIRLRKGK VMNLETESRV VNDKLIKEAR FKVSPDDLFV MISDGVIHAG IGQTLNLGWQ WDNVCEYIQK TYKKDASSKT LAKLLLSACD NLYVHEPGDD TTVVTLKAKK PVKLNLMIGP PVDSSRDEEI VSRFIENEGK KVVCGGTTSH IVARVLGKEI KTSIEYFNPA VPPTAEIEGI NLTTEGVLTL RKTLDLLKTC VSPESSMGDM LKLNKKDGAS RLAKMLLEES TSIYFFVGRA MNPAHQNPEF PLNMGMKFKL VEELAELLTH TGKHISIEYC
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