| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2251 |
|---|
| Symbol | |
|---|
| ID | 7310934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 2629995 |
|---|
| End bp | 2630870 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643609182 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_002506572 |
|---|
| Protein GI | 220929663 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.284926 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAAAT TTTTTGGGGT TACAATAGCA GTATCAATGA TAATAGTTTT AGTTGCAGCA
ATATGTCTCA AAGAAGCAAA GATATTGAAG AACAATGGTA TAAGTGGTAT CGAAACAAAA
ATAAGCGATA AGACAAAAGA GCCTTCAAAT AGTACTGATA AAACCAATGA TAACGGTACA
AAAAAGGAGA CCCCTACAGC TCCCTCTAGT ACTAAACAAC CGGATGACAA AGAAAAGGTA
AAGCCCAAAA CGGCTCCTGT AAAAAGTAAG CCTGTTATTG CACTTACCTT TGATGACGGA
CCACATCCTC AACACACAGT ACAGATAGTT AATGCTTTAA AAAAATATAA TGGACATGCA
ACCTTTTTTG TCGTAGGTAA CAGGGTCGAA AAATATCCCG GTGTTGTAAA ACAAATATCA
CAGAACGGTA ACCAGATCGG CAATCATAGC TATAACCACA AGCAATTAAC AAAGCTAAGT
GAATCCGGTA TAAAGAGCGA TTTGAAAAAG ACTTCTGATA TTTTACAGAA GACAATCAGT
AAAAAACCTT CAATAGTGAG ACCTACTTAT GGCAGTGTAA ATAACAGGGT AAAATCATCC
GCAGGTGCTC CGCTGATTCT TTGGTCTATA GATACTTTAG ATTGGAAGAC AAAGAATAAG
ACTACGACAG TAAATAAAGT AGTTAGTAGA GCAAAGGACG GGGACATTGT ACTGATGCAT
GACTTGTATA AACCATCTGC TCAGGCTGCA GAAGCAATAA TACAAAAATT GACTGCAAAG
GGTTATAAAC TTGTAACCAT TGATGAGCTA TTTGCTACCA GAGGAGTAAA GCCTCAGAAT
GGTCAGGTGT ATAATAACGC TTATAAGAAA AAGTAG
|
|---|
| Protein sequence | MKKFFGVTIA VSMIIVLVAA ICLKEAKILK NNGISGIETK ISDKTKEPSN STDKTNDNGT
KKETPTAPSS TKQPDDKEKV KPKTAPVKSK PVIALTFDDG PHPQHTVQIV NALKKYNGHA
TFFVVGNRVE KYPGVVKQIS QNGNQIGNHS YNHKQLTKLS ESGIKSDLKK TSDILQKTIS
KKPSIVRPTY GSVNNRVKSS AGAPLILWSI DTLDWKTKNK TTTVNKVVSR AKDGDIVLMH
DLYKPSAQAA EAIIQKLTAK GYKLVTIDEL FATRGVKPQN GQVYNNAYKK K
|
|---|
| |