Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2232 |
Symbol | |
ID | 7310917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2610529 |
End bp | 2612277 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643609164 |
Product | hydrogenase, Fe-only |
Protein accession | YP_002506554 |
Protein GI | 220929645 |
COG category | [R] General function prediction only |
COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAACTG TAAACATTAC AATAGACGGT AAGAAACTTC AGGTTGAACA AGGCATAACA ATTTTAGAGG CAGCCAGACA GGCTAATATA AAGATACCTA CACTTTGCTT CCTCAAGGAT ATCAATGAAA TAGGTGCATG TAGGATGTGT CTGGTTGAAA TAAAGGGTGC GAGAGCGTTG CAAGCATCTT GCGTATATCC TGTTGCAGAA GGACTTGAAA TTTATACTCA GAGTCCGGAT GTCAGAGAGG CAAGAAAGGT AACCTTGGAG CTTATCCTTT CCAACCACGA CAAGAAATGT CTTACCTGTG TAAGAAGCAA AAACTGCGAG CTGCAAAACT TGGCTGAGGA ATTAAATATA AAAGATATAA GATTTGAAGG TGCATCAATT GATCTTCCTT TAGATGATTT TTCACCTTCA ATTGTCAGAG ACCCAAATAA ATGCGTGCTG TGCAAACGCT GTGTAAGTAT GTGTAAAAAC ATACAGACAG TTTCTGTTAT CAGTGCAGCT GAGAGAGGTT TCAAATCAAC GATTTCCTGT GCATTTGACA GGTCATTGGA AGAGGTACCG TGTACAATGT GCGGACAGTG TATCAGTGTT TGTCCTGTAG GAGCTTTAAG AGAGAAAGAT GACACTGACA AGGTATGGTC TGCTTTGGCT GACAAGGAAC TTCATGTTGT AGTACAGACA GCTCCTGCTG TTCGTGTTGC TCTGGGTGAG GAGTTTGGGC TTCCTATAGG GACCAGAGTT ACGGGGAAAA TGGCTGCTGC CTTGAACCAC CTGGGTTTTG CCAAAGTATT TGACACAGAT ACTGCTGCTG ATCTTACAAT TATGGAAGAA GGCACCGAGC TCCTAAACAG AATCAAAAAC GGTGGAAAGC TTCCTGTTAT AACTTCTTGT AGTCCGGGAT GGATAAAGTT CTGTGAGCAC AACTACCCTG AATTCCTTGA AAACCTATCA TCTTGTAAAT CACCACATGA AATGTTCGGT GCGGTGCTGA AAACTTACTA TGCTGAAAAG ATGGGTATCG ACCCTAAAAA AATATTTGTA GTGTCCGTAA TGCCATGTAC CGCAAAGAAG TTTGAAGCAC AAAGACCAGA GCTTTCCGCA ACAGGCTTGC CTGATGTTGA CGTAGTTATA ACTACCAGAG AGCTTGCAAG AATGATAAAG GAAGCAGGTA TCGATTTTAA TAATCTTGAG GACATGGATT TTGACGACCC AATGGGTAAC GCAACAGGAG CCGGCGTAAT ATTCGGTGCA ACCGGGGGAG TTATGGAAGC AGCTCTCAGA ACAGTATCTG AGATAGTTGC AGGAAAATCC TTTGAAGATA TTGAATATAC TGCTGTAAGA GGTATAGAGG GTATCAAGGA AGCAACAGTT GCTATAGGTG ACATGAAGGT TAAAGCGGCT GTAGCAAATG GTCTCGGCAA CGCAAGGAAG CTCCTTGACA GTATAAAAGC AGGAGAAGCA GCATATGACT TCGTTGAAAT AATGGCTTGT CCGGGCGGTT GTGTAAACGG CGGAGGACAG CCAATACAAC CTTCTTCTGT AAGAAGCTGG ACTGACTTGC GTACTGAACG TGCAAAGGCA ATATATGAAG AAGATGTAAG TCTTCCAATT AGAAAGTCAC ATGAAAACCC AGTAATCAAA GAAATGTATG ATAAATATTT CGGAGAGCCG GGAAGCCATA AGGCACATGA GATTTTACAC ACACATTATG CTGCAAGGGA AAACTACCCT GTAAAATAG
|
Protein sequence | MSTVNITIDG KKLQVEQGIT ILEAARQANI KIPTLCFLKD INEIGACRMC LVEIKGARAL QASCVYPVAE GLEIYTQSPD VREARKVTLE LILSNHDKKC LTCVRSKNCE LQNLAEELNI KDIRFEGASI DLPLDDFSPS IVRDPNKCVL CKRCVSMCKN IQTVSVISAA ERGFKSTISC AFDRSLEEVP CTMCGQCISV CPVGALREKD DTDKVWSALA DKELHVVVQT APAVRVALGE EFGLPIGTRV TGKMAAALNH LGFAKVFDTD TAADLTIMEE GTELLNRIKN GGKLPVITSC SPGWIKFCEH NYPEFLENLS SCKSPHEMFG AVLKTYYAEK MGIDPKKIFV VSVMPCTAKK FEAQRPELSA TGLPDVDVVI TTRELARMIK EAGIDFNNLE DMDFDDPMGN ATGAGVIFGA TGGVMEAALR TVSEIVAGKS FEDIEYTAVR GIEGIKEATV AIGDMKVKAA VANGLGNARK LLDSIKAGEA AYDFVEIMAC PGGCVNGGGQ PIQPSSVRSW TDLRTERAKA IYEEDVSLPI RKSHENPVIK EMYDKYFGEP GSHKAHEILH THYAARENYP VK
|
| |