Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2190 |
Symbol | |
ID | 7310879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2564058 |
End bp | 2565182 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643609122 |
Product | ROK family protein |
Protein accession | YP_002506512 |
Protein GI | 220929603 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACTA AAGTAAATAG TATTGAGGTT AAAAAAATAA ACAGAAATGC CATATATAAC TTTCTTTACA AACATGAGCC TATTTCTATC CAGGAGATTG CCTACACCTT AAATATGAGC TTGCCTACAG TAACGCAAAA TATAAAGGAG CTTCAGGAAC GTGGGCTGGT AATAGAAACA GGCCTTTTCG AATCCACAGG GGGCAGAAAG GCTAAGGCTA TTTCATATAA TAGCTCGGCA AAATATTCAG TAGGTCTGGA CATAACACGC AACCATGTAA GTATTGTAGT AATAGACCTT AGCGGAAAAC TTCTAAAGAA TTTGAGAATC CAGTACCCTT TTAATAATCA CAAGGAGTAT TTTAAGGGAG TAGGTGATCT TGTCACAAAA CTGGTAAGCG AAGTTGGGAT TGATGAATCC AATATGCTTG GAGTAGGTAT AGCATTGCCA GCCATACTAT CCGATGACCG TCAGACGGTG AGCTACGCTA CAGTTATTGA CTTTCGGGGT GGTAGTATAA ATTCTTTCCA GGAATTTATT CCATATGACA TTATTTTGAG CAACGATGCC AATGCGGGCG GATTTGCGGA GATGTGGCAT GAAGATGCAA ATGAAAATGT GGCATATCTT TCTTTAAACA ATTCTGTCGG AGGCTCCATA ATAATAGCAA AAAATATTTA TGATGGACAG AATCAACGAG CCGGAGAGTT TGGGCACATG ACCATAGTAC CAAACGGAAA AGAGTGCTAT TGCGGTCAAA AAGGGTGTGT TGATGCATAT TGTTCTGCAA AGATTTTATC AGATAGTACC AATGGAAATA TCGCAGAGTT TTTCAGGCTT TTGAAGACGA ATAAGGAACC TCAGAGAAGT TTATGGAATG AATATACATC ACATTTGATT GTAGCAATAA ATAATTTACG TATGTTATTT GATTGTAAAG TTATATTAGG CGGATATGCC GGAGCTTATA TGGATGAATA TATTGATGAG CTAAGGCAAA AGGTGGCAAA ATGTAATACC TTTGAAGTAG ATGGAAATTA CCTTCATGCA TGCAAGTACA AGCTCGAGGC AACAGCTGTA GGTGCTGCAC TTGCTCATGT TGACCAATTC ATAAAAAATG TTTAA
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Protein sequence | MATKVNSIEV KKINRNAIYN FLYKHEPISI QEIAYTLNMS LPTVTQNIKE LQERGLVIET GLFESTGGRK AKAISYNSSA KYSVGLDITR NHVSIVVIDL SGKLLKNLRI QYPFNNHKEY FKGVGDLVTK LVSEVGIDES NMLGVGIALP AILSDDRQTV SYATVIDFRG GSINSFQEFI PYDIILSNDA NAGGFAEMWH EDANENVAYL SLNNSVGGSI IIAKNIYDGQ NQRAGEFGHM TIVPNGKECY CGQKGCVDAY CSAKILSDST NGNIAEFFRL LKTNKEPQRS LWNEYTSHLI VAINNLRMLF DCKVILGGYA GAYMDEYIDE LRQKVAKCNT FEVDGNYLHA CKYKLEATAV GAALAHVDQF IKNV
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