Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2090 |
Symbol | |
ID | 7310791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2448465 |
End bp | 2449043 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643609024 |
Product | ThiJ/PfpI domain protein |
Protein accession | YP_002506415 |
Protein GI | 220929506 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.117884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA TACTGGTTTT TTTGTATGAC GATATGGCAG ATTTTGAAAT ATCATATGCT ACGCATCTTT TAGGACATGA ATTATCAAAA GAAATAGTTC CATGTGCATA TGAAAAGAAG CCTATTAAAA GTAAAGGCGG TTTGTTGTAT ACACCTGTAA TTACTGTTGC CGAAGCAAAA GCAGATGAAT ACGAGGGGTT TTTAATTCCC GGAGGTTGGA ATCCTGTTGT CAAGGTTGAA ATACTTGATC TGATAAATGC TTTTTATTCA GGTGGGAAAC TCATAGCCGC AATCTGTGCA GGCCCCAGAT ATCTAGCAAA GGCCGGTATA TTAAAAGATG TCAAGTATAC CACTTCCATA GTTGAATGGA CACAAGCCAG AAGAGAAGCG TTCGGTAATG AGGATGATCC GTTCCCAAGG GAAAACTATA TTGATACCAG AGTAGTAAGG GACAAAAATG TCATAACCTC AAAAGGTATA TCTTTTGTTG ATTTTGCTAT AGAAGTAGCT GACTATTTCG GTATGTTTAA AAATTCCGAG GATAAGAAAA CTTTGTTTAA TGTGAATACA GACAGATAG
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Protein sequence | MNKILVFLYD DMADFEISYA THLLGHELSK EIVPCAYEKK PIKSKGGLLY TPVITVAEAK ADEYEGFLIP GGWNPVVKVE ILDLINAFYS GGKLIAAICA GPRYLAKAGI LKDVKYTTSI VEWTQARREA FGNEDDPFPR ENYIDTRVVR DKNVITSKGI SFVDFAIEVA DYFGMFKNSE DKKTLFNVNT DR
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