Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2087 |
Symbol | |
ID | 7310788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2445332 |
End bp | 2446672 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643609021 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002506412 |
Protein GI | 220929503 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000442741 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTATTTA AATTTAAAAG ACCTAGGATT TATGGAAATG TTTCAGATGA CAATTACGAG CTGAGCCGTA GGCGTTTTAT TCTTGAGGGT TGCCTTTCAA ATGGTGTCTA TACCCTAACA GCAGGAGCTT TTTTTGCTGG ATATGCTAAA TTTCTAGGAG CATCAGATCA GATAATAGGC CTTATTGTTG CGATGCCTTT ACTTGCTAAT ATTCTTCAAA TGTTCAGTCC AATATTTTTA GAGAAGCTTA CCAGCAGGAA AAGATTGATT GTCACAACTA GTCTTTGTTA TAGGTCATTG CTTGGACTCA TGATAGTTAT TCCTCTGTTA ACACAGAATA CGTCAGCCAG ACTGCTTTTG TTGGCAGGGA TGTATCTTAC GGCCTATCTT ATTTTCAGCT TTTCAAACCC CGCAGGAGGC AGTTGGATAA TAAGTCTTGT TCCTGAGAGA TACAGAGGCA GGTATTTTGG ACTGAGGGAT ACCTTCATCA TTTCGTCAGC GGCTGTTCTC TCCCTATCTA TGGGAAGGGT ACTTGATATA CTCAAAGTTT CCGGAAAGGA GTTTTTGGGG TTTATTATCG TTTTTTCTTT GGTATTGGTA TTGGTGGTAT TGGATATTTA TGTACTTAAT AAGATTAGGG AACCCAAAAT AGTACCTATT AAGCAGAATG TAAATGTAAA GAGTCTGTTT ACTCTGCCAC TAAAGAATAA GCAGTTCCGT CCGGTTATTT TTTTAAATGC TACATGGAGT TTTGCAGCAC AGCTTGCTCT TCCTTTCTTT TCGGTTTATA TGGTAACAGG TTTGGAACTA TCATATACGT TTATAATGGC AGCCAACATT TTAATGTCGG TAGTACAAGC TTCTACGGCT AAATTGTGGG GAAGGCTGGC TGACAAGTTC AGCTGGGAGG TTACAACTAT TATTTCCATA GGAATGTTAG GTCTGTGTCA CTTGACTTGG GCATTTGTAA CCAAGGAAGT TTGCTATTTG ATTATTCCCT TTATACAAAT TTTAGCAGGA GCCGGATGGT CAGGTGTTAA CATGTCTCTG TTTAACATTC AGTTCAAGCA CGCACCACAG GAAGGACGCA CAATTTTTGT TGGTTTTAAT GCTGCGATAG CAGGAGTGAC GGGATTTGCA AGTGCATTGC TTGGAGCATT CCTTGTTGGA GTATTAAGTA ATGTAAAAAT TGATATTGGG ATAACTGTAC TCAACAATAT GTTGATAATT TTTGGGATAT CCGGCACGTT GGTAATTTTA TGTGCAGTAT TTTTTGCCTT AAAATTCTGG ACAAAAAATA AGAAAAGAAA AAATAAATCT GAAAAGAATT TTGCAGGATA A
|
Protein sequence | MVFKFKRPRI YGNVSDDNYE LSRRRFILEG CLSNGVYTLT AGAFFAGYAK FLGASDQIIG LIVAMPLLAN ILQMFSPIFL EKLTSRKRLI VTTSLCYRSL LGLMIVIPLL TQNTSARLLL LAGMYLTAYL IFSFSNPAGG SWIISLVPER YRGRYFGLRD TFIISSAAVL SLSMGRVLDI LKVSGKEFLG FIIVFSLVLV LVVLDIYVLN KIREPKIVPI KQNVNVKSLF TLPLKNKQFR PVIFLNATWS FAAQLALPFF SVYMVTGLEL SYTFIMAANI LMSVVQASTA KLWGRLADKF SWEVTTIISI GMLGLCHLTW AFVTKEVCYL IIPFIQILAG AGWSGVNMSL FNIQFKHAPQ EGRTIFVGFN AAIAGVTGFA SALLGAFLVG VLSNVKIDIG ITVLNNMLII FGISGTLVIL CAVFFALKFW TKNKKRKNKS EKNFAG
|
| |