| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2056 |
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| Symbol | |
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| ID | 7310759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | - |
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| Start bp | 2413347 |
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| End bp | 2415467 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643608990 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_002506382 |
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| Protein GI | 220929473 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATA ACCTGGTTAT TGTGGAGTCT CCTGGAAAAG TTAAATCTAT AAGCAAATTT
TTAGGTAAGG GATATAAAGT AGAGGCTTCT GTCGGACATG TTAGGGATTT GCCTAAAAGC
CAGATGGGCG TTGATATCGA TAATGATTTT GAACCTAAGT ATATTACTAT AAGAGGTAAG
GGAGATGTTA TATCAAAGCT GAAAAAAGAA GCCAAGGCAG CTAAAAAAGT GTTTCTCGCA
ACTGACCCTG ACCGTGAAGG TGAGGCGATA TCCTGGCACT TGGCCAAAAT ATTAAATATT
GATGAAAAGC AGAAATGCAG GGTTTCTTTT AATGAAATAA CACAAAATGC TGTAAAGAAT
GCTATAAAAC AGCCGAGAAC AATAGATATG GGCCTTGTTG ATGCACAACA GGCAAGAAGA
GTACTGGACA GAATAGTGGG CTATAAGATA AGCCCTCTGC TTTGGAAGAA AGTAAGAAAA
GGCTTGAGTG CGGGAAGAGT ACAATCTGTA GCTACAAAAA TGATTTGTGA CAGGGAAGAT
GAAATTGAAA AATTTGAGTC ACAAGAATAT TGGTCTATAA TTGCAAAGCT TGTCAAACCA
AAAGCAAGTC CTAACTTTGG GGCGAAATTC TACGGTATTG GTAAGGAAAA ATTAGAATTA
ACTAATGAGG AACAGGTTAA TTCGATTTTA GAAGAAATAA ATAAAAGCCA ATATATCGTA
CAAAAGGTTA AAGAGCAGGA AAAGAAAAGG GCTGCAGCGG CACCTTTTAT TACAAGTACA
CTACAGCAGG AAGCTTCCAG AAAACTTGGA TATACAACAA AAAGAACCAT GATGGTTGCA
CAGCAGCTTT ATGAAGGCAT TGAAATAAAG GGCCGTGGAT CGGTTGGTCT TATAACCTAT
ATGAGAACGG ACTCAACAAG AATATCAACA GATGCACAGA ATGAGGCCAG AGAGTATATT
AAAACAAAAT ACGGACAGGA TTATATTCCT GAAAAACCAA GAGAATATAA AAACAAATCT
GCTTCACAGG ATGCACATGA AGCAATACGC CCAACATATA TAGATTTACC ACATGAGCAA
ATAAAGGAAT ACCTCAGTCC GGAACAATAC AAGCTATACA GGCTTATTTG GGACAGATTT
ATTTCCAGTC AGATGTCATC CGCTATATAC GATACTGTGT CAGCTGATAT AACTGCGGGA
AAATACCTGT TCAAGGCAAA CGGTTCGAAA GTAAAATTTC CGGGTTTTAT GGTACTGTAT
ACTGAAGGAA ATGATAATGA AGGCAAGGAT GAAGCGGAGC AGGACGAAAA GGAAAACAAA
CTACCTCAGC TGAATGAAGG TGATATTCTT GAACTCAAAG AAAATACACC TAAGCAGCAT
TTTACGCAAC CTCCTGCCAG ATACACCGAG GCAACGCTTG TAAGAGCCTT GGAGGAAAAG
GGTATAGGAA GACCTAGTAC CTACGCTCCT ACGATTACTA CTATTTTATC CAGGGGCTAC
GTACTAAAGG AGAAGAAGCT TTTAGTACCG ACAGAGCTCG GAAAAATAGT AAACGACATA
ATGAAGAATC ATTTTGAGAA CATTGTTGAT ACTAAGTTTA CAGCTGAAAT GGAAAGCGAA
CTGGATTCCG TAGAGGATGG TGACAAAGAA TGGAAGGCCG TTATGAGGGA TTTTTATTCT
TCATTTGCCG GAGTACTTAA AAAAGCCGAA GAATCCATAG GTGATGTAGA ATTACCTGTA
GAGGTATCAG ATGTTCAATG TGATAAATGC GGCAGATACA TGGTTGTTAA ACATGGGAGA
TTTGGTAAAT TCCTTGCCTG CCCGGGATTT CCCGAGTGTA GAAATGCAAA GCCGATTGTA
GAAGAGGCTG GAGTTGAATG TCCTATTTGT AAGGGAAAGG TACTTATTAA AAAGACTAAA
AAGGGTAGAA AGTATATTGG TTGTGAGAAA AACCCTGAAT GTCCCTTTAT GAGTTGGGAT
ATGCCTAGCC CCAATAAGGA AGTCTGTTCT GTTTGCGGAT CATTTATGCT TCAAAAATTC
TCCGGCAAAA AGAAGGTTCT TAAGTGCAGC AACGATAAGT GTACAAGTAA TATAGAAGCC
TCAAAAGATA ATACCAAATA A
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| Protein sequence | MADNLVIVES PGKVKSISKF LGKGYKVEAS VGHVRDLPKS QMGVDIDNDF EPKYITIRGK
GDVISKLKKE AKAAKKVFLA TDPDREGEAI SWHLAKILNI DEKQKCRVSF NEITQNAVKN
AIKQPRTIDM GLVDAQQARR VLDRIVGYKI SPLLWKKVRK GLSAGRVQSV ATKMICDRED
EIEKFESQEY WSIIAKLVKP KASPNFGAKF YGIGKEKLEL TNEEQVNSIL EEINKSQYIV
QKVKEQEKKR AAAAPFITST LQQEASRKLG YTTKRTMMVA QQLYEGIEIK GRGSVGLITY
MRTDSTRIST DAQNEAREYI KTKYGQDYIP EKPREYKNKS ASQDAHEAIR PTYIDLPHEQ
IKEYLSPEQY KLYRLIWDRF ISSQMSSAIY DTVSADITAG KYLFKANGSK VKFPGFMVLY
TEGNDNEGKD EAEQDEKENK LPQLNEGDIL ELKENTPKQH FTQPPARYTE ATLVRALEEK
GIGRPSTYAP TITTILSRGY VLKEKKLLVP TELGKIVNDI MKNHFENIVD TKFTAEMESE
LDSVEDGDKE WKAVMRDFYS SFAGVLKKAE ESIGDVELPV EVSDVQCDKC GRYMVVKHGR
FGKFLACPGF PECRNAKPIV EEAGVECPIC KGKVLIKKTK KGRKYIGCEK NPECPFMSWD
MPSPNKEVCS VCGSFMLQKF SGKKKVLKCS NDKCTSNIEA SKDNTK
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