Gene Ccel_2048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_2048 
Symbol 
ID7310752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2405699 
End bp2407012 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content40% 
IMG OID643608982 
ProductATPase FliI/YscN 
Protein accessionYP_002506374 
Protein GI220929465 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1157] Flagellar biosynthesis/type III secretory pathway ATPase 
TIGRFAM ID[TIGR01026] ATPase FliI/YscN family
[TIGR03496] flagellar protein export ATPase FliI
[TIGR03497] flagellar protein export ATPase FliI 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGGCG TTAACCTATT AAAATACAGA GAAGCATTAA AGTCAAAAGA ATATATAGAT 
TATATCGGAA AGGTATCAAA GGTTGTCGGA CTTACAATAG AATCGGACGG TCCGCAGGTA
AGTATAGGTG ATCTTTGTAA TATACACATT ATCGGTGGCA GTAAGCTTAA AGCGGAGGTA
GTGGGCTTTA AGGATGAAAA GGTTTTGTTA ATGCCCTTGG GTGAAATGAC GGGTATAGGG
CCTGGAAGTA CTGTTTCAGC CAATGGAGAC ATATTGAAGG TTGCAGTAGG GCCTCAACTG
GTAGGCAGAG TTTTAGACGG TTTGGGAAAT CCCATAGACG ACAAGGGGAG CCTTCAATCA
AAACACTATT ATAAAACTGA TAATAAGCCA CCTAATCCTT TGACCAGAAA AAGAATATCG
GAGCCTTTAC CGTTGGGGGT AAGAGCCATT GATGGACTTC TAACAATAGG AAAAGGACAG
AGAGTTGGCA TTTTTGCCGG AAGTGGTGTT GGTAAGAGTA CTTTGATGGG TATGGTTGCC
AGAAACACAA AGGCTGATAT AAATGTTATT GCCTTGATAG GAGAACGAGG AAGAGAAGTT
AGAGAATTTT TGGAAAGAGA TTTAACGGAT GAAGGTCTTG CAAGGTCGGT TGTCGTGGTA
GCAACATCAG ACCAGCCGGC ACTAATAAGG CTTAAAGGAG CAATGGTTGC TACTGCAATC
GCTGAATACT TCAGGGATTG CGGAAAGGAT GTACTGCTTT TGATGGATTC TCTGACAAGG
TATGCAATGG CACAAAGAGA AGTAGGACTT TCTATAGGAG AGCCTCCTGT GTCAAGGGGA
TATACACCAT CGGTTTTCTC AGTTTTTCCA AAATTACTTG AGAGAGCAGG GACTTCTGAC
AAAGGTTCTA TAACGGGTTT ATACACGGTA CTGGTAGACG GTGATGATCT TACGGAGCCT
GTAACTGATA CGGCAAGAGG AATTCTGGAC GGACATATTG TTCTGTCCAG ATCGATGGCA
AATAAAAATC ATTATCCTGC TATTGATGTT CTTGCAAGCG TCAGCAGGGT TATGGGGGAC
ATTATTGATA AAGAACATAA AAAGTCTGCC AATGAAATAA AGAAAGTAAT GGCTGTACAT
AGAGATTCTG AGGATTTAAT AAATATAGGT GCTTATGTAA AAGGGAGCAA TGAGAAGATA
GATTATGCAA TTGAGTGTAT TGAGGATATA ACTTCGTTTC TTCAACAGGA AACCGATGAA
AAAGTTTCAT TTGAAGATAT ACATTCACAG GTACTTAGTT TACTGAAACA GTAA
 
Protein sequence
MSGVNLLKYR EALKSKEYID YIGKVSKVVG LTIESDGPQV SIGDLCNIHI IGGSKLKAEV 
VGFKDEKVLL MPLGEMTGIG PGSTVSANGD ILKVAVGPQL VGRVLDGLGN PIDDKGSLQS
KHYYKTDNKP PNPLTRKRIS EPLPLGVRAI DGLLTIGKGQ RVGIFAGSGV GKSTLMGMVA
RNTKADINVI ALIGERGREV REFLERDLTD EGLARSVVVV ATSDQPALIR LKGAMVATAI
AEYFRDCGKD VLLLMDSLTR YAMAQREVGL SIGEPPVSRG YTPSVFSVFP KLLERAGTSD
KGSITGLYTV LVDGDDLTEP VTDTARGILD GHIVLSRSMA NKNHYPAIDV LASVSRVMGD
IIDKEHKKSA NEIKKVMAVH RDSEDLINIG AYVKGSNEKI DYAIECIEDI TSFLQQETDE
KVSFEDIHSQ VLSLLKQ