| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1985 |
|---|
| Symbol | |
|---|
| ID | 7310697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 2350118 |
|---|
| End bp | 2351290 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643608920 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_002506313 |
|---|
| Protein GI | 220929404 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4214] ABC-type xylose transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.345013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGACGG TTAAAAGTAT TTTCAAAAAT AACATAAGGC AGTATGCCAT GCTAATTGCC
TTGGTTGTAA TAATGGCATT TTTTCAGATC GCAACAAAGG GTGTCCTTCT GTTACCGATG
AACGTGTCAA ATTTAATACT TCAGAACAGT TATGTTCTTA TTCTTGCAGT TGGTATGACT
CTTTGTATTT TGACCGGTGG TAACATAGAT CTTTCCGTGG GTTCGGTTTG TGCTTTCATT
GGCGGAATAA TGGGTATCTT TGTAATTAAT ATGAAAATGA ATGTGGGACT TGCCGTTTTA
CTATGCCTTT TGGTTGGTGG TATTATCGGA ATATGGCAAG GTTTCTGGAT AGCATACGTA
AGAATTCCGG CTTTTATAGT TACCTTGGCA GGAATGCTTA TTTTTAGGGG TCTGACTATA
ACAATGCTTG AAGGTTTGAC TCTATCACCC TTCCCCGATA GCTTTACTAA TCTCAGTGCA
GGTTACATTC CGGACCTTTT TGGCGGATTT GGTACAAAAC TGAATATATT GACTCTTTTC
ATAGGAGTAA TTATTTCAAT TATATATATT TATCTTGAGG TTAAGAAAAG AGCAGAAAGA
AAGAAGTATG ATTTTGAAGT TACACCGGGT TATTTGTTCA TAATCCAGTT AGTCCTTGTG
TTGGCTGCGA TAAATGTTCT CTCATACTGG CTGGCTGTTT ACAAGGGAAT TCCTATAATT
CTTGCATTAA TTGGAATCCT CATACTGGCA TATTCTATTT TTACAATAAA AACAGTACCC
GGACGTTATC TTTATGCAAT GGGCGGAAAT GAAAAGGCAG CAAAACTGTC AGGTATAAAT
ACTAACAAGG TCCTTTTCTT TTCATATGTT AATATGGCAG TGTTGGCTGC TCTTGCAGGT
ATAACCTTTA CTTCACGTCT TAATGCAGCT TCTCCTCAAG CGGGAGTTAA CTTTGAACTT
GATGCTATTG CAGCCTGCTT TATAGGTGGA GCGTCTGCTT ACGGTGGAAT AGGAACAGTT
GTTGGAGGTG TTATTGGTGC CCTGGTTATG GGTGTTCTGA ATAACGGTAT GTCAATACTT
GGAATAGGCA GTGACATGCA GATGACAATC AAGGGCCTTG TATTGTTGGT GGCAGTTGCA
TTTGATGTAT TGTCTAAATC AAAGTCAAAA TAG
|
|---|
| Protein sequence | METVKSIFKN NIRQYAMLIA LVVIMAFFQI ATKGVLLLPM NVSNLILQNS YVLILAVGMT
LCILTGGNID LSVGSVCAFI GGIMGIFVIN MKMNVGLAVL LCLLVGGIIG IWQGFWIAYV
RIPAFIVTLA GMLIFRGLTI TMLEGLTLSP FPDSFTNLSA GYIPDLFGGF GTKLNILTLF
IGVIISIIYI YLEVKKRAER KKYDFEVTPG YLFIIQLVLV LAAINVLSYW LAVYKGIPII
LALIGILILA YSIFTIKTVP GRYLYAMGGN EKAAKLSGIN TNKVLFFSYV NMAVLAALAG
ITFTSRLNAA SPQAGVNFEL DAIAACFIGG ASAYGGIGTV VGGVIGALVM GVLNNGMSIL
GIGSDMQMTI KGLVLLVAVA FDVLSKSKSK
|
|---|
| |