| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1983 |
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| Symbol | |
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| ID | 7310695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | - |
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| Start bp | 2347144 |
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| End bp | 2348937 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643608918 |
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| Product | putative sensor with HAMP domain |
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| Protein accession | YP_002506311 |
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| Protein GI | 220929402 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2972] Predicted signal transduction protein with a C-terminal ATPase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.24245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGATA AAATAGTTAT GAAGGACAAT TCTTTCTTTG GATTATTTAG AAAATTCAGT
ATTTACAGCA TCAGATCCAA AATGACTATT TGTTTTCTGG CATTGGGCCT TGTTCCCATC
CTCCTTTTTG GAATTATTTC ATATCACCTT TATTTGCAAA ACCTCCATAA AAATGTAACA
AGCTATTCAG AGCAGGTAAT TGAAAGAGTT GACAAAAATC TGGAAACCTA CATAAGCGAT
ATTGAAAACA TTATGCGGCT AAAAAGTAAT TACTATTTCC AACAGTATTC TAAATTAAAT
GAAGCAGGGG ATATAGAAGG GAACAGGAAA TATACAGTAA GGATTTGGGA AACTTTTGAT
AGTGTTAAAC AAATGAAAAC AGATTTAGTC GACATAAGAT TCATTTCGTC TTCGGGAAGT
ACTATTAGCT GTTATGGGAG ATACTGGGTA GATGTTTCCA ACGAGCCTTT GTATCGTGAA
TTGATTAACA AAAAAAGTAG TATTGTAGCC ATACAGCCAC CCCATTTAAA TGCTCTGAAC
AAAAAAGTTT TTTCCATCGG TCAGGCAGTA AACCGGAATA TAAACGGAAA TATCGGGATT
ATGGCTATTG ACATAGATAT TAATTTCCTG AAAAAAATCT GTAGCGATAT AAAGCTCGGT
GAAACTGGTT TTGTATTTTT TGAAAAGGAT GGTAAAGTGG TTTTCAGCCC CCAGAGCTCT
GATAAACATG GATATTCAAA TAATATTATA CAAAATCCCA AGCTTATGGA CAGCGAGAAT
GGAAGCTTTA TAGACAGTAT AAACAATACA AATTACATTA TTACCTATAA GACATCGGCT
ATAACGGGTT GGAAAATCGT AGGAGTTTCA CCGGAAGCCG AGATGACCAG TGGGGTCATT
ATGCTAAGCA AGGTATTTTT CTGGCTAATA ACTTTAATAA TCATCATAAT TTTACTCCTT
ACCATATACC TTACTTCTGT TCTGACCAAT CCTATGAGGA AGCTGAGAAG TACTATGAAG
CAAGCTTCTG AAAATGATCT GTCTATTTAT GCAGATATTA GAACCAGAGA TGAAATAGGA
CAGCTTGCAA GCAGTTTTAA TAAAATGATG AATCAGATTA GAGAACTCAT GGATAAGGTT
AAAGAGGATC AGCAGAAGAT TAGAGTTATG GAAATGAAGG CAATGCAGGA GCTTATTAAA
CCTCACTTTA TTTATAATAC TCTTGATTCA ATCATTGGAC TACTTGAACA AAACAGAAAT
GACGATGCCA TAGATATTAT CGATTCCCTC GGCAAATTCT TCAGAACAAG CCTTAGCCAT
GGACGGGAAG TTGTACTGAT AAGAGAGGAG ATTGACCATA TCAGAAGCTA TTTGATGATA
CAGCAATTTA GATTTTCTAA TAAATTCGAT TACTTGTTTG AACTGGATGA TGTGATTTAC
AATTTTAAAA CTGTTAAGTT AATATTGCAG CCGCTGGTCG AGAATTCTAT ATACCACGGT
ATAAGAAGTT TGGATAAAAA AGGTCTTATA GTTATAAACG GCTATTTAAA AGATGACCAG
ATTATTTTTG AAATTTCGGA TAACGGAGAA GGTATAGGAG AAGAAAAAAT TGCTCAGCTT
AACAGGATTA TGTCAGGGGA GGAAGAGGTT GAGGATCAGA ACATGTATTT TGGTATTAGA
AATGTAAATG AACGCATTAA ATTGAACTTT GGGAGTGATT ACGGCTTAAA ATACCAAAGT
AAGGTATCGG TAGGTACAAA AGTAGTGGTA AATATTCCGC AGATAGGCAG GTGA
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| Protein sequence | MGDKIVMKDN SFFGLFRKFS IYSIRSKMTI CFLALGLVPI LLFGIISYHL YLQNLHKNVT
SYSEQVIERV DKNLETYISD IENIMRLKSN YYFQQYSKLN EAGDIEGNRK YTVRIWETFD
SVKQMKTDLV DIRFISSSGS TISCYGRYWV DVSNEPLYRE LINKKSSIVA IQPPHLNALN
KKVFSIGQAV NRNINGNIGI MAIDIDINFL KKICSDIKLG ETGFVFFEKD GKVVFSPQSS
DKHGYSNNII QNPKLMDSEN GSFIDSINNT NYIITYKTSA ITGWKIVGVS PEAEMTSGVI
MLSKVFFWLI TLIIIIILLL TIYLTSVLTN PMRKLRSTMK QASENDLSIY ADIRTRDEIG
QLASSFNKMM NQIRELMDKV KEDQQKIRVM EMKAMQELIK PHFIYNTLDS IIGLLEQNRN
DDAIDIIDSL GKFFRTSLSH GREVVLIREE IDHIRSYLMI QQFRFSNKFD YLFELDDVIY
NFKTVKLILQ PLVENSIYHG IRSLDKKGLI VINGYLKDDQ IIFEISDNGE GIGEEKIAQL
NRIMSGEEEV EDQNMYFGIR NVNERIKLNF GSDYGLKYQS KVSVGTKVVV NIPQIGR
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