| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1978 |
|---|
| Symbol | |
|---|
| ID | 7310691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 2341223 |
|---|
| End bp | 2342230 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643608913 |
|---|
| Product | germination protease |
|---|
| Protein accession | YP_002506306 |
|---|
| Protein GI | 220929397 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01441] GPR endopeptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000089254 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATT TGTCAAACAG GTATACAGAC CTTGCCATTG AGGCACATGA AATATTTATG
AACAGCAGTG AAGCAAAACA GCAGGCTAAG GAGGGAAAAA CACCTCCGGG TGTGGTAATT
GAAAATGCCG GAGACGAGGA TGTAAAGATT ACAAGAGTCC ATATTACATC CCGTACAGGT
GAGGCTTCCA TCGGAAAGCC CATGGGAAAC TATATAACTC TTGAGGTTCC GGAGCTGAAG
GATAATAATG AGGATGTAAA CAAAAAGACT ATTGATGCAA TGGCAAAGGA ATTGAGGGAT
ATCCTGAAAC TGAAAGAAGG CTCTACAACA CTTGTCATAG GATTAGGAAA CTGGAATGTA
ACTCCTGATG CGTTAGGGCC GAAGGTAGTG TCAAACCTCA TGGTAACAAG GCATCTGCTT
CAATATGTCC CCGAGCATGT TGATGAGGGG GTGAGTCCTG TTTGTGCTAT TTCTCCGGGA
GTACTAGGAA TAACTGGAAT AGAGACCGGG GAAATTGTAA AAGGAGTTGT TGACAGGCTT
AAACCTGATG CATTGATTGC AATAGATGCT CTTGCTGCAA GGAGCATGGA AAGGGTTAGT
ACTACTATTC AGATTGCAGA TACAGGGATT GCACCGGGAG GGGGAGTCGG AAACAAGAGA
ATGGAGCTAA GCGAAAAGAC TCTGGGGATG CCCGTAGTTG CTATAGGCGT GCCGACTGTG
GTTGATGCGG CTACTTTGAC AAATGATGCC ATGGATCTTG TAATTGATAG CCTGATGAAT
GAATCACCAA AGGATTCCGG TTTTTATAAT ACCCTGAAGG ATATTGACAG AGATCAGAAG
TATGAACTTA TTAAGGAAGC CTTAAATCCA TTTGTAGGTC ATCTTATTGT TACACCTAAG
GAAATAGATG ATATAATCAG CCGTGTTTCA AAAGTGGTAG CCAACGGGCT CAATATGGCT
CTACATCAAG GAATCACACT TGGTGACGTC GGCAGATATA TCAACTGA
|
|---|
| Protein sequence | MINLSNRYTD LAIEAHEIFM NSSEAKQQAK EGKTPPGVVI ENAGDEDVKI TRVHITSRTG
EASIGKPMGN YITLEVPELK DNNEDVNKKT IDAMAKELRD ILKLKEGSTT LVIGLGNWNV
TPDALGPKVV SNLMVTRHLL QYVPEHVDEG VSPVCAISPG VLGITGIETG EIVKGVVDRL
KPDALIAIDA LAARSMERVS TTIQIADTGI APGGGVGNKR MELSEKTLGM PVVAIGVPTV
VDAATLTNDA MDLVIDSLMN ESPKDSGFYN TLKDIDRDQK YELIKEALNP FVGHLIVTPK
EIDDIISRVS KVVANGLNMA LHQGITLGDV GRYIN
|
|---|
| |