Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1975 |
Symbol | |
ID | 7310690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 2336938 |
End bp | 2338302 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643608910 |
Product | hypothetical protein |
Protein accession | YP_002506303 |
Protein GI | 220929394 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.156079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACGATA ATGTAAAGTT AAACACAGCA AGGAAAAAAG ATACTTCTTA TATACAAAAA CAACCAAAAC ATACCCCTAC AAGGTTAATG AAAAGCTCTG ATCCAGCAGT TATAATTCAA AGACTGAGAA GATTCCCTCA ATCATTTACA AAAGCTGATG CTATGGTTTT ACAACGTACC ATCGGCAATA AGGCAGTTTG TAAGCTTATG GGAGAGATTG GATTATTTAA TAATAGTCCT GCATCTATAC AACAAGAGGC TTTACCAGAA AAACTTACTC AAATGAAGAA AGAAAAAAAT AAAACAGGTT TATCGGATAA CTTGAAAGCT GGTGTTGAAA AGCTGTCAGG CTTATCTATG GATGATGTCA GAGTACATTA TAATTCAGGT AAACCTGAAC GTTTAGGTGC ATTGGCATAC ACTCAGGGAA CTGATATCTA TGTGTCCCCG GGACAAGAAA AACATATACC TCATGAGGTA TGGCATGTGG TACAGCAAGT CCAGGGCAGG GTGAAGCCAA CTATTCATAT GTACGGGGCG GCTGTGAATG ATGACGCAGG GCTAGAGCGA GAAGCTAGTG AAATGGGGAA AAAAGCGTGT AAAGAGACCA TTCCGCGTGA AAAGGGTAAA ACCAATGACC ATATATGGTT ATCGCATAAC CCAATAATTC AAGGGCAATG GCTTAATTTT GGAATAGGTC AGTTTCCGGA CATAAAAACA ATGGAAAACA GAGGTGAAAA CCAAGTGACA AGTTTTCCTC AGAAGAATAC CGTACAATCA CAAAATGTAT TAAGAATACA TACTAAGTTT TTAGGTGACC CTAGAGTTAG AGATTTCATT TCACGTACAT GTAAACACAA GCCTGTGATA AATGAAAGAA AAGAGCCAAT TCAAATGGTT GTTCTTGCTT CATTTTACGG TGCACCGGTA CAATCATGGG CCATATTACA AGCTCCATTA GCCCCAGGAC CCCTTGGTGC TCCGAATCCT CCTGGTTGGG TTGGAAATGC GCATCCAAAT CACCACCAGA GGAGCCATTT GATAGGAGGA CAATTTGGAG CACCTAAAAC ATTAAACAAT TTAGTAACCC TTACGGACGG CTCAAATCAT CCGGGTATGT CAGTACATGA AAATATCTTA GCTGCAGCAA TTGCTAATAA CCCTGCTCAT CTATTCTTAT ACCATGTAAC AACTGACAAT ACTGTTTTTG CGGCTACAAA TTCGGTCGGT ATTCCTACTG TTGCAACTCC CGCACCACAG GGAGTTATAA TGGATGCTGT GAATTTAACT ACGGGAATTC CTGTATTACA AGCCGTTTAT GTACCTAACA ATATTTTCCA AAACCATGCC GGATGTGTTG ATTGA
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Protein sequence | MYDNVKLNTA RKKDTSYIQK QPKHTPTRLM KSSDPAVIIQ RLRRFPQSFT KADAMVLQRT IGNKAVCKLM GEIGLFNNSP ASIQQEALPE KLTQMKKEKN KTGLSDNLKA GVEKLSGLSM DDVRVHYNSG KPERLGALAY TQGTDIYVSP GQEKHIPHEV WHVVQQVQGR VKPTIHMYGA AVNDDAGLER EASEMGKKAC KETIPREKGK TNDHIWLSHN PIIQGQWLNF GIGQFPDIKT MENRGENQVT SFPQKNTVQS QNVLRIHTKF LGDPRVRDFI SRTCKHKPVI NERKEPIQMV VLASFYGAPV QSWAILQAPL APGPLGAPNP PGWVGNAHPN HHQRSHLIGG QFGAPKTLNN LVTLTDGSNH PGMSVHENIL AAAIANNPAH LFLYHVTTDN TVFAATNSVG IPTVATPAPQ GVIMDAVNLT TGIPVLQAVY VPNNIFQNHA GCVD
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