| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1960 |
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| Symbol | |
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| ID | 7310675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 2319623 |
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| End bp | 2321836 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643608894 |
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| Product | YhgE/Pip C-terminal domain protein |
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| Protein accession | YP_002506288 |
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| Protein GI | 220929379 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1511] Predicted membrane protein |
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| TIGRFAM ID | [TIGR03057] X-X-X-Leu-X-X-Gly heptad repeats
[TIGR03061] YhgE/Pip N-terminal domain
[TIGR03062] YhgE/Pip C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.779213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACAT TGAAAAAGTA TAAGAAATTT GCCGTAATCG TGGCAGTTAT ACTAATTCCA
TTGGTCTACA GTTTCTTCTA TCTTGATGCT TTTTGGGATC CATACAGCAA ACTTGACAAA
CTTCCTGTAG CCGTGGTAAA CCAGGATAAC GGAGCAACTA TCGACGGCGA AAACAGAAAT
CTGGGAAAAG AAATTACAGA CAATCTAAAA ACCGATAAAA ATCTTAAATG GGTTATTACG
TCGGAATCTG ATGCAAAGGA CGGTTTAGAG AACAGAAGGT ATTACGCAAT GATTAGTATA
CCTGGAGATT TCTCAAAAAA TATTTCTTCA GCAGCAGACA TTGACAAGAC TCAGGGTAAT
CTGATATATA CCGTTAATGA AAAGGGAAAT TACCTGGCAA GTCAGGTGCT GAGCAGGGTC
ACATTAGAGT TTAAGGATAA AATTTCCAAA TCTGTTTCTG AAGAAATTGT AGGAACCCTT
TTAGATCAGA TAAAGGACCT TCCTACTAGT CTAAAAGAAC TTGATGATGG CTTAAAGGAA
ATAAAAGACG GAGCAGAACT ACTCTATGAC AGCAATGGTA AAATTGTAGA CGGACAGAAG
AATTTTAATG ACGGTGTTAA TAAGCTGAAC AACGGACTTG CAGATGCCAA TAATGGTTCA
AAGACTCTTA TACAAGGTTC AAAACAGCTT AGCGACGGTG CAGAACTATT CTACAGAAAT
TTATCAGGCG GCTCAGGTAA AATGACAGCT CTGGTTAACG GTTCAAATAC TTTTATGTCA
GGTCTGTCAA ATCTGAATTC GGGTTTAAAC CAGTTGAATT CCAGCATTAC AGAAGCAGCT
CCGCAAATAT CTCAGTTGTC TAAAGGAACC TTGGACTTAA ACAGCGGAGT ACAGTCCTAT
ACATCAGGTG TTGACAAGTA TATTGAATCG GTAAACAAGG TTTCTCAGAC TCAATCTGCT
TTGGCAAACT CTATTCAAAA ATACGTGGCA AGTCATCCTG AAGCATTGAC AGACCCAAAT
TTCAAGGCTG TAATCGCTAC TCTGGAGGCC TCAAAGTCTG TTCCTGAACA GCTTAAAACC
GCCGGAGGGC AGCTTTCTTC CGCCGGAAAA CTACTTACTG ACGGTTCAGG CAAGGTTGCA
GGTGGAGTCT CACAGTTGAC TACCCAGTTG AGTTCAGCAG CACAAGGTAT AAATAAACTT
GCTGCAGGAT CAAATGAATT GAACAAATCA TACCCCATGA TTAACCAAGG TATCCTTGAT
ACTGCCTCCA GCATCAAAAC TGCATCCGAT AAATCCAAGG AACTTTCTTC AGGGGCTTCA
TCGGTTAATG ACGGAGTTGC AAAACTTTCA AGCGGTATTT CAGAACTGGC AGCCGGCAGC
GAGGAATTAT CCAAGAATTC TGGAGTGTTA CTTGACGGTG AAACAAAGAT TCAGGACAGT
TTAGGCAAAC TTAAGGATGG GGTAACAGAA GCAAGCAGCG GTGTGTCCTC TTCCCTTCTA
AAGGCTGATG GTAAATTAAA CGGTACAGAA GGCCTAAAGG AATATGCAGC AGATCCTGTT
AAAATAACAG AAAAGAAGGT TTACGGTATT CCTGACTATG GTACTGCGTT TACACCTTAT
TTTGTATCAC TATCACTTTG GGTTGGTGCA TTGCTGATGT TCTTTGCAAT TTATCTGGAT
GAGGAAGTAA GGTTTCGCAA ATTCTCCTCC AAGTCTAAAG GTATTATGAG ATTTTTTGCA
TATACTTTAA TAGGTATTGC CCAGGCTCTT GTATTAGACT TTGTCATAGT AAAAGGTTTA
CATTTGGAAG TTGCAAATAT GGGGCTTTTT GTGCTGACTA GTATAATAAT ATCATTGTCA
TTTACATCAA TTATGAGATT TTTACTAGTA CAGTTAAGAG ATGTAGGCAA GTTCCTTGCA
ATTCTGCTAT TGATATTACA GCTTACTTCA TGTGGAGGAA CCTTCCCTAT GGAACTTGTT
CCACGATTCT TCAATGTACT TAATCCGTTT ATGCCAATGA CATATTCGGT TAATGCGTTA
AGAGAAGTAA TTGCAGGTAT CAATAATGGA TTCCTTGCAC AGAACCTTAT TGTTTTAGTT
ACCGTAATGA TAGGATTTCT TATATTGAAC CTTGTAGTAT CAAAGCTTAG ATTTGGAAGC
ATTTCTTCTG ATTCTGATGA TTTTGTTAAA ATATCCGAAG AAGTTTCAGC ATAA
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| Protein sequence | MQTLKKYKKF AVIVAVILIP LVYSFFYLDA FWDPYSKLDK LPVAVVNQDN GATIDGENRN
LGKEITDNLK TDKNLKWVIT SESDAKDGLE NRRYYAMISI PGDFSKNISS AADIDKTQGN
LIYTVNEKGN YLASQVLSRV TLEFKDKISK SVSEEIVGTL LDQIKDLPTS LKELDDGLKE
IKDGAELLYD SNGKIVDGQK NFNDGVNKLN NGLADANNGS KTLIQGSKQL SDGAELFYRN
LSGGSGKMTA LVNGSNTFMS GLSNLNSGLN QLNSSITEAA PQISQLSKGT LDLNSGVQSY
TSGVDKYIES VNKVSQTQSA LANSIQKYVA SHPEALTDPN FKAVIATLEA SKSVPEQLKT
AGGQLSSAGK LLTDGSGKVA GGVSQLTTQL SSAAQGINKL AAGSNELNKS YPMINQGILD
TASSIKTASD KSKELSSGAS SVNDGVAKLS SGISELAAGS EELSKNSGVL LDGETKIQDS
LGKLKDGVTE ASSGVSSSLL KADGKLNGTE GLKEYAADPV KITEKKVYGI PDYGTAFTPY
FVSLSLWVGA LLMFFAIYLD EEVRFRKFSS KSKGIMRFFA YTLIGIAQAL VLDFVIVKGL
HLEVANMGLF VLTSIIISLS FTSIMRFLLV QLRDVGKFLA ILLLILQLTS CGGTFPMELV
PRFFNVLNPF MPMTYSVNAL REVIAGINNG FLAQNLIVLV TVMIGFLILN LVVSKLRFGS
ISSDSDDFVK ISEEVSA
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