| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1938 |
|---|
| Symbol | |
|---|
| ID | 7310653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 2287740 |
|---|
| End bp | 2288873 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643608872 |
|---|
| Product | peptidase S1 and S6 chymotrypsin/Hap |
|---|
| Protein accession | YP_002506266 |
|---|
| Protein GI | 220929357 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TTAATTTGGT AAGATGTGCA TTTCTAGTTA TTGTTTCTGT TTTATGTACT
GCAAATACCT TTGCCGCCGG AACTACCCTT AGGATAAATG GGCAGGAACT CATCGACGGG
GTAAAAACAA TAGAGGGCAG GCAGTATATA TCTGCCGATG CAATATCCTC TCATTTGGAA
GGGATTACGG TTACTCAGGG AAACAATACC ATTGAAATAA ATTCTGTGAA CAAAATTTCA
AATGTAGTCT CAAAAGTAAG CCCTTCTGTT GTTGGAATTA TTGGTAAATT AAAAGAGAGC
AGTTATGAAT ATGATGAAAC TTCAGATAAT ATCATATTCG GTACAGGAGT TATATATCGC
AGTAGTGGTT ACATAATAAC AAATGCCCAT GTTGTAAAGG ATATGGAGAG TATTGTTGTA
GTACTTTCAA ACAGTAAAGC ATACAAGGCC AGACTTAAGG CTATTGATGA AGATCTCGAT
CTGGCAGAGA TAAAAATAGA TAAGGGCGGC TTGCAGCCTG CAAAATTTGG TGATATTTCG
CAAGTGGCAG TAGGGGATGA AGTCGTTGCA ATAGGAACAC CATTGTCCTT CGGACTTAGA
AATTCCGCGA CAAGGGGAAT AATAAGCGGA ATGAACAGGT CAGAGAACAG ACAGTATAGG
TTTATACAGA CAGATGCTGC TATCAATTCT GGAAACAGCG GCGGCCCACT GGTCAATATG
AAAGGTGAGG TTGTAGGGAT AAATTCATGG GTTTATGCTG GAATAGGCGT GCAGGGTATG
AGCTTTTCAA TACCTATAGA CTCTGTAAGA TACGCAATAA ACCAGTTTGA AAAGTTTGGA
AAGATAAGAC GACCCTACCT AGGTTTGGCT TTTTCCGATA GTATAACCTC AATATACGGA
CTACCGAATA CGGTGTCAGG GGTGACTGTA AAATCAATAG AAAAAGGTTC TCCTGCACAG
AAATACAATA TTAAAGTTGA TGATAGACTG ATTTCCATTA ATGGAATTAA GGTAAATTCG
ACAACAGATT ACAATGAAGA AATGAAGAAG TATCTGCCTG GAGACATTGC TGAATTCAAA
TTACAGCGTG ACAACAGGGA ATTCAGTATT TCAGTTACTT TTGGAGAAAA ATAA
|
|---|
| Protein sequence | MKKFNLVRCA FLVIVSVLCT ANTFAAGTTL RINGQELIDG VKTIEGRQYI SADAISSHLE
GITVTQGNNT IEINSVNKIS NVVSKVSPSV VGIIGKLKES SYEYDETSDN IIFGTGVIYR
SSGYIITNAH VVKDMESIVV VLSNSKAYKA RLKAIDEDLD LAEIKIDKGG LQPAKFGDIS
QVAVGDEVVA IGTPLSFGLR NSATRGIISG MNRSENRQYR FIQTDAAINS GNSGGPLVNM
KGEVVGINSW VYAGIGVQGM SFSIPIDSVR YAINQFEKFG KIRRPYLGLA FSDSITSIYG
LPNTVSGVTV KSIEKGSPAQ KYNIKVDDRL ISINGIKVNS TTDYNEEMKK YLPGDIAEFK
LQRDNREFSI SVTFGEK
|
|---|
| |