Gene Ccel_1931 details

Gene Information

• Locus tag: Ccel_1931
• ID: 7310647
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: -
• Start bp: 2281517
• End bp: 2281978
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 643608865
• Product: FeS cluster assembly scaffold protein NifU
• Protein accession: YP_002506259
• Protein GI: 220929350
• COG category: [C] Energy production and conversion
• COG ID: [COG0822] NifU homolog involved in Fe-S cluster formation
• TIGRFAM ID: [TIGR01999] FeS cluster assembly scaffold IscU; [TIGR03419] FeS cluster assembly scaffold protein NifU, Clostridium type

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000270101
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATAGTG AAAAGGTTAT GGATCATTTT TCAAATCCGA GAAATGTTGG GGAAATAGAA 
GATGCTGATG GTGTAGGACA GGTCGGAAAC TCAAAATGCG GAGATATAAT GAAAATGTAT 
CTTAAAATAG AGGATAATAT AGTTGTTGAT GCAAAGTTTA AGACCTTCGG ATGCGGTGCA 
GCAGTTGCTA CCAGCAGCAT GGCAACCGAG TTGGTCAAGG GTAAGACAGT TGAAGAGGCT 
ATGAATATAA CCAATAAGGC CGTTGCAGAG GCATTGGACG GACTACCTCC GGCAAAGATG 
CATTGTTCAA ATCTTGCAGA GGAAGCAATA GCAGCTGCAC TGACAGATTA TAGAAAAAGA 
AACGGATTGG TTGACTCAAA TGAAGGCGGG GATTGTACCG GTGAGTGTTC ATGCTGTCAC 
CACAGTCATG GCCGTGAGGA AAACTTTGAA GACGAAGAAT AG 

 

Protein sequence

MYSEKVMDHF SNPRNVGEIE DADGVGQVGN SKCGDIMKMY LKIEDNIVVD AKFKTFGCGA 
AVATSSMATE LVKGKTVEEA MNITNKAVAE ALDGLPPAKM HCSNLAEEAI AAALTDYRKR 
NGLVDSNEGG DCTGECSCCH HSHGREENFE DEE