Gene Ccel_1902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1902 
Symbol 
ID7310624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2259602 
End bp2260486 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content39% 
IMG OID643608836 
ProductPolyprenyl synthetase 
Protein accessionYP_002506230 
Protein GI220929321 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.267224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTTA AGGAAAAAAA CAATATATAT GTGAATATGA TTGAAGAGAG GCTTCATAAT 
ATTATTCCGG AAGTAGACGA ATACTGTCTT GATATAGAGC AAGCAATGTC CTACAGTCTT
TTAGCCGGAG GCAAGAGATT GAGGCCTGTA TTGGCACTTG CTGTTGCTGA AATGTTTGAT
AAGCCTTTTG ATGAAGTAAT TAATTTTGGC TGTGCGATTG AAATGATCCA TACATATTCA
CTGATACATG ATGATTTGCC GGCTATGGAT AATGATGATT ATAGAAGGGG TAAGCTGACG
AACCATAAGG TATTCGGAGA AGCCATGGCA ATACTTGCCG GAGATGGATT ATTGAATATG
GCTTATGAGA TAATGATTAA TGATGCGGTT GAATCAAGGA ATATTGAAAA AATGCGGGCT
GCCGGAATAG TCGCGAAGTA TGCAGGGGCA TTAGGGATGG TTGGAGGTCA GGTAATTGAT
CTTCAATCAG AAGAAAAAAC CATTGAAAGT GATAGACTCA AAACAATGCA CAGACTAAAA
ACAGGTGCGT TGATAAAAGC CCCGGTGGAA GCTGCGGCAG TAATATGCGG TGCCGATAAA
AAGGAATTTG AGCTTTTGTC AGGATATGCT GCAAATTTGG GATTAGCTTT TCAGATAAAG
GACGATATCC TGGACATCGA AGGAACCGTT GAAAACATGG GTAAGAACCC GGGTAATGAT
TCTTCATGCC ATAAATCAAC TTATGTAACC ATGTATGGAC TTGAAGAATC CAAAAAGCTA
CTGCAAACAG TAACTCAAGA AGGTATTTCC TGTCTGGATG CCTTCGGCGA TAAGGGACAG
TTTATGAAAG AACTTGCATT ATCATTGACT GTAAGGGACA GATAA
 
Protein sequence
MNFKEKNNIY VNMIEERLHN IIPEVDEYCL DIEQAMSYSL LAGGKRLRPV LALAVAEMFD 
KPFDEVINFG CAIEMIHTYS LIHDDLPAMD NDDYRRGKLT NHKVFGEAMA ILAGDGLLNM
AYEIMINDAV ESRNIEKMRA AGIVAKYAGA LGMVGGQVID LQSEEKTIES DRLKTMHRLK
TGALIKAPVE AAAVICGADK KEFELLSGYA ANLGLAFQIK DDILDIEGTV ENMGKNPGND
SSCHKSTYVT MYGLEESKKL LQTVTQEGIS CLDAFGDKGQ FMKELALSLT VRDR