| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1899 |
|---|
| Symbol | |
|---|
| ID | 7312297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 2255485 |
|---|
| End bp | 2256297 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643608833 |
|---|
| Product | hemolysin A |
|---|
| Protein accession | YP_002506227 |
|---|
| Protein GI | 220929318 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1189] Predicted rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00478] hemolysin TlyA family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000632481 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAAAAGG AAAGACTTGA TGTACTACTT GTAAACAAAG GCTTGTTTGA GAGTCGTGAA
AAATGCAAGA GTGCCATTAT GGCGGGTCTT GTATGGATTG ATGGGATCAG GGAGGACAAG
CCGGGTACAA AAGTTCCTGT CGAATGTACG ATTGAAATAA GAGAAAATCT CAATCCTTTT
GTAAGCCGGG GAGGGTTAAA GCTTGCTAAA GCTGTCAGTA ACTTTGATAT AGATCTTGCA
AATAAGACCT GTCTTGATAT AGGTGCATCA ACCGGTGGTT TTACGGATTG TATGCTAAAA
AACGGTGCAG CGAAGGTAGT TGCTATTGAT GTCGGGTACG GTCAGCTGGC ATGGGAGCTG
AGGAATGACC CCAGGGTTAT ATGTATGGAA CGTACAAATG TCAGGTATGT TAAGCCTGAG
GACATAGGTT TTTTGTCGGA CTTTGCTTCC ATCGATGTCT CATTTATATC ACTCACAAAG
GTATTACCAG CAGTTCTGGC AGTTTTAAAG GACGAGGCAG AGCTGGTATG TCTGATAAAA
CCACAGTTCG AGGCAGGACG TGAAAAGGTT GGCAAACACG GTGTTGTAAG GGACAGCGGC
GTTCATAAGG AAGTTATACA TTATATAATA AATTTTGTTA CTGCCGCAAA TTTATTTGTA
AAAGAGTTAT CATTTTCACC GATTAAAGGC CCGGAAGGCA ATATCGAGTA TTTATTATAT
ATTACAAAAA CAGAAAATCA AGATTCAAAA GATATAGATA AACTTGTAGA AAGTGTAGTT
TCGGAAGCTC ACAGCACACT GGTAAAAAGC TGA
|
|---|
| Protein sequence | MEKERLDVLL VNKGLFESRE KCKSAIMAGL VWIDGIREDK PGTKVPVECT IEIRENLNPF
VSRGGLKLAK AVSNFDIDLA NKTCLDIGAS TGGFTDCMLK NGAAKVVAID VGYGQLAWEL
RNDPRVICME RTNVRYVKPE DIGFLSDFAS IDVSFISLTK VLPAVLAVLK DEAELVCLIK
PQFEAGREKV GKHGVVRDSG VHKEVIHYII NFVTAANLFV KELSFSPIKG PEGNIEYLLY
ITKTENQDSK DIDKLVESVV SEAHSTLVKS
|
|---|
| |