| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1885 |
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| Symbol | |
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| ID | 7310610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | - |
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| Start bp | 2237446 |
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| End bp | 2239122 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643608819 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_002506213 |
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| Protein GI | 220929304 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAA TACAAAAATA TGAAAAGGTT TTAATAAACC TTTACTGGGT ATTTATTGTA
TTACTGTTCT CTGCTTTGAT ATTCAAGCAG GAACTTTATA CTGAAGCTAA TGTTATGTTT
AGTAAGAAAA TTTTTCTCAT AGTATTTTTA ATATTAATTT TAGCACTAAA TATTGTAAAA
ACTATATTTG TTAAAAATAT AAGACTATAC TCGGATAAAA TATTTGATGT TTTCAGGATA
ATTGAAGTCT TTTTGATTTC GGTGTTCCTA CTGCCTTTTT CGGATGGCAT AGAGTACCTT
TCTCTTGTTT TGCCTTTATT TTTTATAACT ATTCACAAAG GCAAGAAGGC AAGTTATATT
TTACTGGCAT TGAGTGCAGT AATCAAATTA ATAAATCTGA TAGTATTGTA CAGTGTACAA
GAATCCTTTG ATACTACACA ATTAGTCTAT GGTGTTTTTA AAATTGCTTG TATATATATA
TTATTCATTG CTATATTTAA TATCACTGCA AAAATATACT CGGGTAATTT AAAAAATGAG
CAGGAAAATG ATCGGTTGAT TGCAGAATTG GGTGAGAAGT ATGAGCAGCT GGCTTCGGCC
CAGGATAAAA TAAAAAACCA GTATGAAAAG CTGAAGGAAA CTAATTTCAA ACTTGAAGAT
ACGAATAAAC GGCTTACATC CAGTATAGCA GAGTTCTATA CCCTGCAGCA GGTAAGTGAG
GCCATAGGTT CTATACTGGA CATAAACGAG TTGTTGAATT TTGTAAACGA TGTGATTATA
GGAGTAATGG GTGTAAACTA TTCTACAATA GTATTATTTG ACCAAAAGAA AAACAGACTC
AAAGTTCAGT TTACCAACAT TACCAATAAA GAGGAACTTG CAATTTTAAC TGATAATGTA
AACTGTGAGC TTTTACTTGA TATATTGCAA AATGAAAAGC CAATAATAGA AAATATGGTG
GACCCTGACA AATACGATTT TATCAAAACA AGAAATATTG GTTCCTTTAT GTGTATACCA
TTAAGTTTGA AATCCAGAAA GTTTGGACTT ACACTAATAG AGCACAGGAA CAATAATACC
TTTAATACCG AAAATCTTCG TTTGCTGACC ACTCTCGGAA AACAGGTAAG TATGGCAATC
GAAAACGCCC AACTTTATGC CAATCTCCAG GAGATGGCCA CTGTGGATGG TTTAACAGGG
GTATACAATC GTGTATATTT TCATGAAAAA TTTGAAAATG AATTCAGGAT GGCTAAGGAA
AAGGGATACA ACTTATCTCT TGTTATTCTT GACATTGACT TTTTCAAGAT ATTTAATGAT
ACCTACGGTC ATCTGTTTGG CGATGTAGTA CTGAAAGAAG TGGCACAGAC CGTTAAGAAT
AATCTACGGG GAACTGATAC TATTGCAAGG TTCGGGGGAG AGGAATTTGT ACTTATCCTA
CCTCGGACAT CAATACAGCA GGCCCATGAA AAAGTTGAGT TTCTGCGGAC CAGGATTGCA
GGCAATATAA TTAAGGATAA CCTTATATCA GCCTCTGTAA CCGCAAGCTT TGGGATAGCG
TGCTATCCTG AAACCTCTTC AAATCAGGTT GGATTAATCA GAGATGCAGA CAATGCACTG
TACAAGGCAA AGGAAAGCGG CAGAAATTGT ATTATGATTG CCCAAAAGGT GAGTTAA
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| Protein sequence | MDKIQKYEKV LINLYWVFIV LLFSALIFKQ ELYTEANVMF SKKIFLIVFL ILILALNIVK
TIFVKNIRLY SDKIFDVFRI IEVFLISVFL LPFSDGIEYL SLVLPLFFIT IHKGKKASYI
LLALSAVIKL INLIVLYSVQ ESFDTTQLVY GVFKIACIYI LFIAIFNITA KIYSGNLKNE
QENDRLIAEL GEKYEQLASA QDKIKNQYEK LKETNFKLED TNKRLTSSIA EFYTLQQVSE
AIGSILDINE LLNFVNDVII GVMGVNYSTI VLFDQKKNRL KVQFTNITNK EELAILTDNV
NCELLLDILQ NEKPIIENMV DPDKYDFIKT RNIGSFMCIP LSLKSRKFGL TLIEHRNNNT
FNTENLRLLT TLGKQVSMAI ENAQLYANLQ EMATVDGLTG VYNRVYFHEK FENEFRMAKE
KGYNLSLVIL DIDFFKIFND TYGHLFGDVV LKEVAQTVKN NLRGTDTIAR FGGEEFVLIL
PRTSIQQAHE KVEFLRTRIA GNIIKDNLIS ASVTASFGIA CYPETSSNQV GLIRDADNAL
YKAKESGRNC IMIAQKVS
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