| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1878 |
|---|
| Symbol | |
|---|
| ID | 7310603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 2231102 |
|---|
| End bp | 2232376 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643608812 |
|---|
| Product | sporulation integral membrane protein YlbJ |
|---|
| Protein accession | YP_002506206 |
|---|
| Protein GI | 220929297 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3314] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02871] sporulation integral membrane protein YlbJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.169606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTATT TTCTATTTAC ATCATTTATC GCTTTTTGTC TAACCTTTTA TTTTTGTAAT
AAAAATAAAA TCGTTCTATA TATTAAAAAA AGTTTCTTGC CTATTTGTGC CATATTGTTT
ATTATCGCTC TGATAGTTTT TCCAAAGACT GCCGTTTCTT CTGCTGTAAA AGGTATTCAT
CTGTGGTTGG AGGTTGTTTT TCCATCACTT TTTCCATTTT TTGTTGCCTC TCAATTACTT
AACCGTTCAG GATTTATAGG GTTTGCAGGT GTTATAATGG AACCGATTAT GAGGCCCATT
TTCAATATAC CCGGTTGCGG CTCCTTTGCT CTTGCTATGG GTATTGTAAG CGGGTATCCT
ATAGGTGCTT CAATAACAAG TGATTTGAAA CGACAGAACC TTATATCCAA AACAGAAGCC
GAGAGACTTC TGACCTTTAC TAACAATTCA GGCCCTTTGT TTATTATGGG AGCTGTAGCT
GTAGGAATGT TCAATATGCC CTCGGCTGGG TATCTTCTTT ATATTAGCCA TGTTGCTGCC
AGCCTCACAG TAGGTTTTAT TTTCAGATAC TATAAAACTT CTGAAAAAAG TCCTAAAAAA
CCTTATCTAA AACTATCGCA AAAAATCAAA ATCGAATTAA AAAGACTAAA AAATTCTGAT
ATGAATACAT TCACTCTTTT TGGTGAATGT ATAAAAAATT CTATATCAAC TATTTTGGCT
ATTGGTGGAT TTATTATATT TTTTTCAGTT TTAATAAATA TTATGATCTC AAGCGGAATT
AGCGGATGGG TATGCAGCAC AGTCCCTGCT CTACTTGGCA AACTGGGTCT GGGGCCTCAA
ATATTAGAAG GAATGTTTTG CGGTTTTTTT GAAATAACCA CAGGCGCAAA CCTTATTAAC
TCAGCAAATG CACCTTTAGT TATAAAACTA TGCACGGTCA GCATGATAAT AGGTTGGGCA
GGCCTCTCAG TCCATGCTCA GGTATTAAGC GTAATTAACG GATCTAACAT CAGTGCAAAG
CCGTATATAG TAGGTAAAGC CCTTCAAGGT ATTTTATCCG GCTTATATAC TTTTACAGGT
TATAAATTAT TCAGCAGCTT TATTCACAAA ACATCTTTAG TGTTTGCTAA TTCAAAAAAC
TCATTTTCCA ACAACTGGAT GAATATACTA GAATCCTCTT TACACTCAGT CCTGTCAATA
TCGGCGATAA TGCTGATAAT TACTGCTGTT TATTTATGTA CAACAACCTT TATGGCAAGG
AAAAACTTAT TTTAG
|
|---|
| Protein sequence | MNYFLFTSFI AFCLTFYFCN KNKIVLYIKK SFLPICAILF IIALIVFPKT AVSSAVKGIH
LWLEVVFPSL FPFFVASQLL NRSGFIGFAG VIMEPIMRPI FNIPGCGSFA LAMGIVSGYP
IGASITSDLK RQNLISKTEA ERLLTFTNNS GPLFIMGAVA VGMFNMPSAG YLLYISHVAA
SLTVGFIFRY YKTSEKSPKK PYLKLSQKIK IELKRLKNSD MNTFTLFGEC IKNSISTILA
IGGFIIFFSV LINIMISSGI SGWVCSTVPA LLGKLGLGPQ ILEGMFCGFF EITTGANLIN
SANAPLVIKL CTVSMIIGWA GLSVHAQVLS VINGSNISAK PYIVGKALQG ILSGLYTFTG
YKLFSSFIHK TSLVFANSKN SFSNNWMNIL ESSLHSVLSI SAIMLIITAV YLCTTTFMAR
KNLF
|
|---|
| |