Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1864 |
Symbol | |
ID | 7310587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2218524 |
End bp | 2219699 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643608795 |
Product | Sensor DegS domain protein |
Protein accession | YP_002506192 |
Protein GI | 220929283 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000165606 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAAGCT ATAAACACAA TTCTGTACAG ATGAATGAAA TAATTTCAAA GACAATAAAA TCTCTTAAAT CCGGTAAAAA TGAGATTATT GAAATTGCTG AGAATTCCAG AAAAGAATGC AAGAGACTTG AAGATGAACT GGTAACATTA AAAAGTCAGG TATTTGAAAT TGTCAGTGTA ATTGAAAATT TGGAACATGA TCTTAAACAG AGCAAAAAGA AACTGTATGA CGTTAATAAG GATTTCAACA GTCATAGCCA GAATGAGCTT GCTCAGGCGT ATCAGTCAGC TGACAATATA AGGGTTGAAC TTGCTGTAAG GCGTGAACAG GAGACTTTTC TTATAAGAAG AAGAAACGAC CTTGAAATAA GAATTCGGGA TTGTTTAAAA ACACTTGAAA GGGCAGATAG TCTTATAGGA CATGTGGGGA TTGCACTGGA CTACTTAAGC GGTGATCTTC AAAACGTAGG AGAGCAGTTG GACAATTTGC AGCAGAGACA ATTCTTGGGC ATCAAGATTA TAGAGGCTCA GGAGGAAGAA CGCAAAAGGG TAGCCAGAGA AATACACGAT GGTCCTGCAC AATCTATGTC AAATATTGTA ATAAAAGCCG AAATTTGTGA AAGGCTATTA GATAAAGATA TTGACGAAGC AAGGAAAGAA TTGCAGAATC TAAAAAAGGT TATGAGAGAT AGTCTTCAGG AGGTCAGAAA GATAATATAC AACCTGAGAC CAATGGCCCT TGACGATTTA GGCTTACTGC CCACTTTGGA GCGTTATGTA ATTTCTTTCA GAGAAGAAAC CGGAATAGAT GTTCAGCTGA GATCCAGAGC AATAAATGAA GAGATTAAAT CCGTTATATC TCTTGCTGTG TTCAGAATTG TTCAGGAAGC CTTGAATAAT GTACTAAAAC ACGCACAGGC TAAAAGAGTT TCAATTCTTT TAGAGCATGT CAATAAGAAA TTAAATATAA TTATTGTAGA TAATGGTGTT GGATTTAACA CTGACGATGT TAAGGTAATA GAACCTGAAA GTACTGGTGG GTTTGGTCTT TTTAGCATGA AAGAGAGGGT GGCCCTGCTT GAAGGAGAGG TGAATATAGT ATCACAGGTA GGAATAGGAA CAAAGATAAA AATTCATATA CCATTAATGG ATGAAGGGGA GGACACTCAA AAATGA
|
Protein sequence | MRSYKHNSVQ MNEIISKTIK SLKSGKNEII EIAENSRKEC KRLEDELVTL KSQVFEIVSV IENLEHDLKQ SKKKLYDVNK DFNSHSQNEL AQAYQSADNI RVELAVRREQ ETFLIRRRND LEIRIRDCLK TLERADSLIG HVGIALDYLS GDLQNVGEQL DNLQQRQFLG IKIIEAQEEE RKRVAREIHD GPAQSMSNIV IKAEICERLL DKDIDEARKE LQNLKKVMRD SLQEVRKIIY NLRPMALDDL GLLPTLERYV ISFREETGID VQLRSRAINE EIKSVISLAV FRIVQEALNN VLKHAQAKRV SILLEHVNKK LNIIIVDNGV GFNTDDVKVI EPESTGGFGL FSMKERVALL EGEVNIVSQV GIGTKIKIHI PLMDEGEDTQ K
|
| |